RNA–Protein interactions for RNA: ENST00000497314.1

SETDB1-212, Transcript of SET domain bifurcated 1, humanhuman

TSL 2

Gene SETDB1, Length 2,321 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-212ENST00000497314 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
SETDB1-212ENST00000497314 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
SETDB1-212ENST00000497314 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
SETDB1-212ENST00000497314 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
SETDB1-212ENST00000497314 ABCC9O60706 1549 aa20.32■□□□□ 0.84
SETDB1-212ENST00000497314 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
SETDB1-212ENST00000497314 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
SETDB1-212ENST00000497314 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
SETDB1-212ENST00000497314 NACADO15069 1562 aa19.91■□□□□ 0.78
SETDB1-212ENST00000497314 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
SETDB1-212ENST00000497314 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
SETDB1-212ENST00000497314 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
SETDB1-212ENST00000497314 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SETDB1-212ENST00000497314 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
SETDB1-212ENST00000497314 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
SETDB1-212ENST00000497314 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
SETDB1-212ENST00000497314 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
SETDB1-212ENST00000497314 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
SETDB1-212ENST00000497314 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
SETDB1-212ENST00000497314 WIZO95785 1651 aa18.92■□□□□ 0.62
SETDB1-212ENST00000497314 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
SETDB1-212ENST00000497314 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
SETDB1-212ENST00000497314 CHIC1Q5VXU3 224 aa18.63■□□□□ 0.57
SETDB1-212ENST00000497314 PEG3Q9GZU2 1588 aa18.62■□□□□ 0.57
SETDB1-212ENST00000497314 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
SETDB1-212ENST00000497314 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
SETDB1-212ENST00000497314 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
SETDB1-212ENST00000497314 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
SETDB1-212ENST00000497314 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
SETDB1-212ENST00000497314 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
SETDB1-212ENST00000497314 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
SETDB1-212ENST00000497314 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
SETDB1-212ENST00000497314 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
SETDB1-212ENST00000497314 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
SETDB1-212ENST00000497314 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
SETDB1-212ENST00000497314 CFTRP13569 1480 aa18.02■□□□□ 0.47
SETDB1-212ENST00000497314 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
SETDB1-212ENST00000497314 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
SETDB1-212ENST00000497314 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
SETDB1-212ENST00000497314 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.46
SETDB1-212ENST00000497314 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
SETDB1-212ENST00000497314 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
SETDB1-212ENST00000497314 NESP48681 1621 aa17.86■□□□□ 0.45
SETDB1-212ENST00000497314 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
SETDB1-212ENST00000497314 SOGA1O94964 1423 aa17.85■□□□□ 0.45
SETDB1-212ENST00000497314 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
SETDB1-212ENST00000497314 CUX1P39880 1505 aa17.81■□□□□ 0.44
SETDB1-212ENST00000497314 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
SETDB1-212ENST00000497314 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
SETDB1-212ENST00000497314 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
SETDB1-212ENST00000497314 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
SETDB1-212ENST00000497314 EEA1Q15075 1411 aa17.69■□□□□ 0.42
SETDB1-212ENST00000497314 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SETDB1-212ENST00000497314 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
SETDB1-212ENST00000497314 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
SETDB1-212ENST00000497314 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
SETDB1-212ENST00000497314 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
SETDB1-212ENST00000497314 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
SETDB1-212ENST00000497314 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
SETDB1-212ENST00000497314 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
SETDB1-212ENST00000497314 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
SETDB1-212ENST00000497314 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.39
SETDB1-212ENST00000497314 CUX2O14529 1486 aa17.52■□□□□ 0.39
SETDB1-212ENST00000497314 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
SETDB1-212ENST00000497314 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
SETDB1-212ENST00000497314 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
SETDB1-212ENST00000497314 KIF21BO75037 1637 aa17.5■□□□□ 0.39
SETDB1-212ENST00000497314 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
SETDB1-212ENST00000497314 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
SETDB1-212ENST00000497314 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
SETDB1-212ENST00000497314 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
SETDB1-212ENST00000497314 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
SETDB1-212ENST00000497314 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
SETDB1-212ENST00000497314 IGF1RP08069 1367 aa17.39■□□□□ 0.37
SETDB1-212ENST00000497314 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
SETDB1-212ENST00000497314 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
SETDB1-212ENST00000497314 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
SETDB1-212ENST00000497314 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.37
SETDB1-212ENST00000497314 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
SETDB1-212ENST00000497314 WDR62O43379 1518 aa17.31■□□□□ 0.36
SETDB1-212ENST00000497314 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
SETDB1-212ENST00000497314 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
SETDB1-212ENST00000497314 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
SETDB1-212ENST00000497314 CLIP1P30622 1438 aa17.27■□□□□ 0.35
SETDB1-212ENST00000497314 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
SETDB1-212ENST00000497314 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
SETDB1-212ENST00000497314 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
SETDB1-212ENST00000497314 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
SETDB1-212ENST00000497314 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■■□□ 16
SETDB1-212ENST00000497314 CUL7Q14999 1698 aa17.2■□□□□ 0.34
SETDB1-212ENST00000497314 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
SETDB1-212ENST00000497314 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
SETDB1-212ENST00000497314 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
SETDB1-212ENST00000497314 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
SETDB1-212ENST00000497314 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
SETDB1-212ENST00000497314 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
SETDB1-212ENST00000497314 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
SETDB1-212ENST00000497314 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
SETDB1-212ENST00000497314 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
SETDB1-212ENST00000497314 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms