RNA–Protein interactions for RNA: ENST00000497252.5

IVD-208, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 4

Gene IVD, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-208ENST00000497252 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
IVD-208ENST00000497252 ABCC9O60706 1549 aa39.14■■■■□ 3.86
IVD-208ENST00000497252 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
IVD-208ENST00000497252 DNAJC5BQ9UF47 199 aa37.25■■■■□ 3.55
IVD-208ENST00000497252 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
IVD-208ENST00000497252 NACADO15069 1562 aa36.72■■■■□ 3.47
IVD-208ENST00000497252 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
IVD-208ENST00000497252 PABPN1Q86U42 306 aaKnown RBP eCLIP36.39■■■■□ 3.42
IVD-208ENST00000497252 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
IVD-208ENST00000497252 MYO15BQ96JP2 1530 aa36.09■■■■□ 3.37
IVD-208ENST00000497252 BICRAQ9NZM4 1560 aa35.99■■■■□ 3.35
IVD-208ENST00000497252 SHROOM4Q9ULL8 1493 aa35.53■■■■□ 3.28
IVD-208ENST00000497252 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
IVD-208ENST00000497252 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
IVD-208ENST00000497252 CC2D2AQ9P2K1 1620 aa35.35■■■■□ 3.25
IVD-208ENST00000497252 CECR2Q9BXF3 1484 aa35.35■■■■□ 3.25
IVD-208ENST00000497252 EIF4G1Q04637 1599 aaKnown RBP35.16■■■■□ 3.22
IVD-208ENST00000497252 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
IVD-208ENST00000497252 DNAJC5Q9H3Z4 198 aa34.63■■■■□ 3.13
IVD-208ENST00000497252 CUX2O14529 1486 aa34.01■■■■□ 3.04
IVD-208ENST00000497252 NCAPD3P42695 1498 aa33.94■■■■□ 3.02
IVD-208ENST00000497252 ERCC6Q03468 1493 aa33.84■■■■□ 3.01
IVD-208ENST00000497252 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
IVD-208ENST00000497252 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
IVD-208ENST00000497252 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
IVD-208ENST00000497252 SMARCA4P51532 1647 aa33.51■■■□□ 2.96
IVD-208ENST00000497252 NESP48681 1621 aa33.47■■■□□ 2.95
IVD-208ENST00000497252 BAZ1BQ9UIG0 1483 aaKnown RBP33.34■■■□□ 2.93
IVD-208ENST00000497252 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
IVD-208ENST00000497252 PEG3Q9GZU2 1588 aa33.25■■■□□ 2.91
IVD-208ENST00000497252 THOC2Q8NI27 1593 aaKnown RBP33.23■■■□□ 2.91
IVD-208ENST00000497252 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
IVD-208ENST00000497252 PDS5BQ9NTI5 1447 aa33.07■■■□□ 2.88
IVD-208ENST00000497252 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
IVD-208ENST00000497252 MROH2BQ7Z745 1585 aa32.99■■■□□ 2.87
IVD-208ENST00000497252 CADPSQ9ULU8 1353 aa32.87■■■□□ 2.85
IVD-208ENST00000497252 TRIM41Q8WV44 630 aa32.8■■■□□ 2.84
IVD-208ENST00000497252 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
IVD-208ENST00000497252 WDR62O43379 1518 aa32.71■■■□□ 2.83
IVD-208ENST00000497252 WIZO95785 1651 aa32.54■■■□□ 2.8
IVD-208ENST00000497252 CEP164Q9UPV0 1460 aa32.53■■■□□ 2.8
IVD-208ENST00000497252 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
IVD-208ENST00000497252 OSCARQ8IYS5 282 aa32.42■■■□□ 2.78
IVD-208ENST00000497252 CFTRP13569 1480 aa32.37■■■□□ 2.77
IVD-208ENST00000497252 URB2Q14146 1524 aaKnown RBP32.2■■■□□ 2.74
IVD-208ENST00000497252 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
IVD-208ENST00000497252 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
IVD-208ENST00000497252 RIMBP3CA6NJZ7 1639 aa31.94■■■□□ 2.7
IVD-208ENST00000497252 RIMBP3BA6NNM3 1639 aa31.94■■■□□ 2.7
IVD-208ENST00000497252 RIMBP3Q9UFD9 1639 aa31.94■■■□□ 2.7
IVD-208ENST00000497252 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
IVD-208ENST00000497252 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
IVD-208ENST00000497252 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
IVD-208ENST00000497252 ARHGEF11O15085 1522 aa31.81■■■□□ 2.68
IVD-208ENST00000497252 CCDC88BA6NC98 1476 aa31.79■■■□□ 2.68
IVD-208ENST00000497252 TOPBP1Q92547 1522 aa31.78■■■□□ 2.68
IVD-208ENST00000497252 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
IVD-208ENST00000497252 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
IVD-208ENST00000497252 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.66
IVD-208ENST00000497252 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
IVD-208ENST00000497252 AQRO60306 1485 aaKnown RBP eCLIP31.55■■■□□ 2.645e-7■■■■■ 27.6
IVD-208ENST00000497252 TARBP1Q13395 1621 aaKnown RBP31.52■■■□□ 2.64
IVD-208ENST00000497252 CHD1O14646 1710 aa31.49■■■□□ 2.63
IVD-208ENST00000497252 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
IVD-208ENST00000497252 TRHP20396 242 aaPredicted RBP31.45■■■□□ 2.63
IVD-208ENST00000497252 FBLN2P98095 1184 aa31.45■■■□□ 2.63
IVD-208ENST00000497252 POLA1P09884 1462 aaPredicted RBP31.41■■■□□ 2.62
IVD-208ENST00000497252 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
IVD-208ENST00000497252 SOGA1O94964 1423 aa31.3■■■□□ 2.6
IVD-208ENST00000497252 TDRD9Q8NDG6 1382 aaKnown RBP31.29■■■□□ 2.6
IVD-208ENST00000497252 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
IVD-208ENST00000497252 SNAPC4Q5SXM2 1469 aa31.19■■■□□ 2.58
IVD-208ENST00000497252 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
IVD-208ENST00000497252 CLASP1Q7Z460 1538 aa31.18■■■□□ 2.58
IVD-208ENST00000497252 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.57
IVD-208ENST00000497252 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.57
IVD-208ENST00000497252 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
IVD-208ENST00000497252 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
IVD-208ENST00000497252 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
IVD-208ENST00000497252 CUX1P39880 1505 aa31.02■■■□□ 2.56
IVD-208ENST00000497252 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
IVD-208ENST00000497252 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
IVD-208ENST00000497252 PBRM1Q86U86 1689 aa30.83■■■□□ 2.53
IVD-208ENST00000497252 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
IVD-208ENST00000497252 ABCA5Q8WWZ7 1642 aa30.74■■■□□ 2.51
IVD-208ENST00000497252 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
IVD-208ENST00000497252 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
IVD-208ENST00000497252 NUP160Q12769 1436 aa30.6■■■□□ 2.49
IVD-208ENST00000497252 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
IVD-208ENST00000497252 CEP170Q5SW79 1584 aa30.56■■■□□ 2.48
IVD-208ENST00000497252 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
IVD-208ENST00000497252 FHAD1B1AJZ9 1412 aa30.49■■■□□ 2.47
IVD-208ENST00000497252 SHROOM2Q13796 1616 aa30.49■■■□□ 2.47
IVD-208ENST00000497252 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
IVD-208ENST00000497252 ERICH3Q5RHP9 1530 aa30.39■■■□□ 2.46
IVD-208ENST00000497252 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
IVD-208ENST00000497252 KIF13AQ9H1H9 1805 aa30.33■■■□□ 2.45
IVD-208ENST00000497252 PRG4Q92954 1404 aaPredicted RBP30.33■■■□□ 2.45
IVD-208ENST00000497252 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
IVD-208ENST00000497252 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms