RNA–Protein interactions for RNA: ENST00000497100.5

KDM5C-214, Transcript of lysine demethylase 5C, humanhuman

TSL 5

Gene KDM5C, Length 1,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-214ENST00000497100 NISCHQ9Y2I1 1504 aa43.87■■■■■ 4.61
KDM5C-214ENST00000497100 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
KDM5C-214ENST00000497100 ABCC9O60706 1549 aa37.46■■■■□ 3.59
KDM5C-214ENST00000497100 ZCCHC6Q5VYS8 1495 aaKnown RBP36.7■■■■□ 3.47
KDM5C-214ENST00000497100 DCAF1Q9Y4B6 1507 aa36.33■■■■□ 3.41
KDM5C-214ENST00000497100 NACADO15069 1562 aa36.32■■■■□ 3.4
KDM5C-214ENST00000497100 MYO15BQ96JP2 1530 aa36.29■■■■□ 3.4
KDM5C-214ENST00000497100 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
KDM5C-214ENST00000497100 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
KDM5C-214ENST00000497100 UNC13AQ9UPW8 1703 aa35.55■■■■□ 3.28
KDM5C-214ENST00000497100 SCRIBQ14160 1630 aa35.45■■■■□ 3.27
KDM5C-214ENST00000497100 BICRAQ9NZM4 1560 aa35.26■■■■□ 3.23
KDM5C-214ENST00000497100 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
KDM5C-214ENST00000497100 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
KDM5C-214ENST00000497100 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
KDM5C-214ENST00000497100 CECR2Q9BXF3 1484 aa34.15■■■■□ 3.06
KDM5C-214ENST00000497100 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
KDM5C-214ENST00000497100 SMARCA4P51532 1647 aa33.96■■■■□ 3.03
KDM5C-214ENST00000497100 CC2D2AQ9P2K1 1620 aa33.95■■■■□ 3.03
KDM5C-214ENST00000497100 BAZ1AQ9NRL2 1556 aaPredicted RBP33.93■■■■□ 3.02
KDM5C-214ENST00000497100 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
KDM5C-214ENST00000497100 PEG3Q9GZU2 1588 aa33.65■■■□□ 2.98
KDM5C-214ENST00000497100 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
KDM5C-214ENST00000497100 RSF1Q96T23 1441 aaPredicted RBP33.6■■■□□ 2.97
KDM5C-214ENST00000497100 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
KDM5C-214ENST00000497100 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
KDM5C-214ENST00000497100 WIZO95785 1651 aa33.5■■■□□ 2.95
KDM5C-214ENST00000497100 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
KDM5C-214ENST00000497100 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
KDM5C-214ENST00000497100 TOP2AP11388 1531 aaKnown RBP33.16■■■□□ 2.9
KDM5C-214ENST00000497100 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
KDM5C-214ENST00000497100 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
KDM5C-214ENST00000497100 NESP48681 1621 aa32.62■■■□□ 2.81
KDM5C-214ENST00000497100 LAMC3Q9Y6N6 1575 aa32.55■■■□□ 2.8
KDM5C-214ENST00000497100 CADPSQ9ULU8 1353 aa32.52■■■□□ 2.8
KDM5C-214ENST00000497100 CFTRP13569 1480 aa32.49■■■□□ 2.79
KDM5C-214ENST00000497100 PRDM2Q13029 1718 aa32.33■■■□□ 2.77
KDM5C-214ENST00000497100 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
KDM5C-214ENST00000497100 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
KDM5C-214ENST00000497100 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
KDM5C-214ENST00000497100 ERCC6Q03468 1493 aa32.17■■■□□ 2.74
KDM5C-214ENST00000497100 CEP164Q9UPV0 1460 aa32.08■■■□□ 2.73
KDM5C-214ENST00000497100 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
KDM5C-214ENST00000497100 MRC2Q9UBG0 1479 aa31.96■■■□□ 2.71
KDM5C-214ENST00000497100 WDR62O43379 1518 aa31.9■■■□□ 2.7
KDM5C-214ENST00000497100 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
KDM5C-214ENST00000497100 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
KDM5C-214ENST00000497100 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
KDM5C-214ENST00000497100 CUX1P39880 1505 aa31.73■■■□□ 2.67
KDM5C-214ENST00000497100 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
KDM5C-214ENST00000497100 CUX2O14529 1486 aa31.72■■■□□ 2.67
KDM5C-214ENST00000497100 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
KDM5C-214ENST00000497100 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
KDM5C-214ENST00000497100 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
KDM5C-214ENST00000497100 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
KDM5C-214ENST00000497100 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
KDM5C-214ENST00000497100 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
KDM5C-214ENST00000497100 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
KDM5C-214ENST00000497100 IFT140Q96RY7 1462 aa31.39■■■□□ 2.61
KDM5C-214ENST00000497100 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
KDM5C-214ENST00000497100 WDR97A6NE52 1622 aa31.32■■■□□ 2.61
KDM5C-214ENST00000497100 SOGA1O94964 1423 aa31.29■■■□□ 2.6
KDM5C-214ENST00000497100 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
KDM5C-214ENST00000497100 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
KDM5C-214ENST00000497100 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.59
KDM5C-214ENST00000497100 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
KDM5C-214ENST00000497100 AQRO60306 1485 aaKnown RBP eCLIP31.1■■■□□ 2.572e-8■■■■■ 33.4
KDM5C-214ENST00000497100 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
KDM5C-214ENST00000497100 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.57
KDM5C-214ENST00000497100 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
KDM5C-214ENST00000497100 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
KDM5C-214ENST00000497100 PBRM1Q86U86 1689 aa30.98■■■□□ 2.55
KDM5C-214ENST00000497100 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
KDM5C-214ENST00000497100 KIF27Q86VH2 1401 aa30.87■■■□□ 2.53
KDM5C-214ENST00000497100 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
KDM5C-214ENST00000497100 RUSC2Q8N2Y8 1516 aa30.85■■■□□ 2.53
KDM5C-214ENST00000497100 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
KDM5C-214ENST00000497100 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
KDM5C-214ENST00000497100 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
KDM5C-214ENST00000497100 IGF1RP08069 1367 aa30.72■■■□□ 2.51
KDM5C-214ENST00000497100 CHD1O14646 1710 aa30.7■■■□□ 2.5
KDM5C-214ENST00000497100 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
KDM5C-214ENST00000497100 CUL7Q14999 1698 aa30.65■■■□□ 2.5
KDM5C-214ENST00000497100 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
KDM5C-214ENST00000497100 EEA1Q15075 1411 aa30.58■■■□□ 2.49
KDM5C-214ENST00000497100 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
KDM5C-214ENST00000497100 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
KDM5C-214ENST00000497100 PRXQ9BXM0 1461 aa30.5■■■□□ 2.47
KDM5C-214ENST00000497100 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
KDM5C-214ENST00000497100 FBLN2P98095 1184 aa30.46■■■□□ 2.47
KDM5C-214ENST00000497100 CEP170Q5SW79 1584 aa30.44■■■□□ 2.46
KDM5C-214ENST00000497100 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
KDM5C-214ENST00000497100 NUP160Q12769 1436 aa30.44■■■□□ 2.46
KDM5C-214ENST00000497100 FAM9AQ8IZU1 332 aaPredicted RBP30.42■■■□□ 2.46
KDM5C-214ENST00000497100 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
KDM5C-214ENST00000497100 RAPGEF2Q9Y4G8 1499 aa30.41■■■□□ 2.46
KDM5C-214ENST00000497100 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
KDM5C-214ENST00000497100 OSCARQ8IYS5 282 aa30.35■■■□□ 2.45
KDM5C-214ENST00000497100 KIF21BO75037 1637 aa30.34■■■□□ 2.45
KDM5C-214ENST00000497100 SHROOM2Q13796 1616 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms