RNA–Protein interactions for RNA: ENST00000496978.5

TRIM2-210, Transcript of tripartite motif containing 2, humanhuman

TSL 4

Gene TRIM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-210ENST00000496978 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
TRIM2-210ENST00000496978 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
TRIM2-210ENST00000496978 ABCC9O60706 1549 aa31.4■■■□□ 2.62
TRIM2-210ENST00000496978 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
TRIM2-210ENST00000496978 NACADO15069 1562 aa29.72■■■□□ 2.35
TRIM2-210ENST00000496978 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
TRIM2-210ENST00000496978 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
TRIM2-210ENST00000496978 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
TRIM2-210ENST00000496978 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
TRIM2-210ENST00000496978 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
TRIM2-210ENST00000496978 ZCCHC6Q5VYS8 1495 aaKnown RBP29.2■■■□□ 2.26
TRIM2-210ENST00000496978 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
TRIM2-210ENST00000496978 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
TRIM2-210ENST00000496978 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
TRIM2-210ENST00000496978 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
TRIM2-210ENST00000496978 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
TRIM2-210ENST00000496978 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
TRIM2-210ENST00000496978 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
TRIM2-210ENST00000496978 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
TRIM2-210ENST00000496978 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
TRIM2-210ENST00000496978 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
TRIM2-210ENST00000496978 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
TRIM2-210ENST00000496978 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
TRIM2-210ENST00000496978 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
TRIM2-210ENST00000496978 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
TRIM2-210ENST00000496978 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.93
TRIM2-210ENST00000496978 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
TRIM2-210ENST00000496978 NESP48681 1621 aa27.05■■□□□ 1.92
TRIM2-210ENST00000496978 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
TRIM2-210ENST00000496978 CUX2O14529 1486 aa26.93■■□□□ 1.9
TRIM2-210ENST00000496978 WIZO95785 1651 aa26.85■■□□□ 1.89
TRIM2-210ENST00000496978 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
TRIM2-210ENST00000496978 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
TRIM2-210ENST00000496978 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
TRIM2-210ENST00000496978 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
TRIM2-210ENST00000496978 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
TRIM2-210ENST00000496978 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
TRIM2-210ENST00000496978 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
TRIM2-210ENST00000496978 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
TRIM2-210ENST00000496978 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
TRIM2-210ENST00000496978 CFTRP13569 1480 aa26.36■■□□□ 1.81
TRIM2-210ENST00000496978 WDR62O43379 1518 aa26.34■■□□□ 1.81
TRIM2-210ENST00000496978 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
TRIM2-210ENST00000496978 CEP164Q9UPV0 1460 aa26.33■■□□□ 1.81
TRIM2-210ENST00000496978 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.78
TRIM2-210ENST00000496978 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
TRIM2-210ENST00000496978 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
TRIM2-210ENST00000496978 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
TRIM2-210ENST00000496978 ZNF608Q9ULD9 1512 aaPredicted RBP25.81■■□□□ 1.72
TRIM2-210ENST00000496978 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
TRIM2-210ENST00000496978 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
TRIM2-210ENST00000496978 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
TRIM2-210ENST00000496978 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
TRIM2-210ENST00000496978 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
TRIM2-210ENST00000496978 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
TRIM2-210ENST00000496978 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
TRIM2-210ENST00000496978 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
TRIM2-210ENST00000496978 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
TRIM2-210ENST00000496978 AQRO60306 1485 aaKnown RBP eCLIP25.59■■□□□ 1.69
TRIM2-210ENST00000496978 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
TRIM2-210ENST00000496978 CUX1P39880 1505 aa25.5■■□□□ 1.67
TRIM2-210ENST00000496978 SOGA1O94964 1423 aa25.49■■□□□ 1.67
TRIM2-210ENST00000496978 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
TRIM2-210ENST00000496978 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
TRIM2-210ENST00000496978 CHD1O14646 1710 aa25.44■■□□□ 1.66
TRIM2-210ENST00000496978 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
TRIM2-210ENST00000496978 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
TRIM2-210ENST00000496978 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
TRIM2-210ENST00000496978 FBLN2P98095 1184 aa25.36■■□□□ 1.65
TRIM2-210ENST00000496978 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
TRIM2-210ENST00000496978 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
TRIM2-210ENST00000496978 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
TRIM2-210ENST00000496978 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
TRIM2-210ENST00000496978 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
TRIM2-210ENST00000496978 ABCA10Q8WWZ4 1543 aa25.18■■□□□ 1.62
TRIM2-210ENST00000496978 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
TRIM2-210ENST00000496978 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
TRIM2-210ENST00000496978 CHMP7Q8WUX9 453 aaPredicted RBP25.18■■□□□ 1.62
TRIM2-210ENST00000496978 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
TRIM2-210ENST00000496978 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.61
TRIM2-210ENST00000496978 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
TRIM2-210ENST00000496978 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
TRIM2-210ENST00000496978 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
TRIM2-210ENST00000496978 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
TRIM2-210ENST00000496978 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
TRIM2-210ENST00000496978 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
TRIM2-210ENST00000496978 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
TRIM2-210ENST00000496978 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
TRIM2-210ENST00000496978 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
TRIM2-210ENST00000496978 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
TRIM2-210ENST00000496978 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
TRIM2-210ENST00000496978 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
TRIM2-210ENST00000496978 NUP160Q12769 1436 aa24.84■■□□□ 1.57
TRIM2-210ENST00000496978 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
TRIM2-210ENST00000496978 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
TRIM2-210ENST00000496978 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
TRIM2-210ENST00000496978 IGF1RP08069 1367 aa24.62■■□□□ 1.53
TRIM2-210ENST00000496978 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
TRIM2-210ENST00000496978 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
TRIM2-210ENST00000496978 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms