RNA–Protein interactions for RNA: ENST00000496846.1

AC006978.1-201, humanhuman

BASIC

Gene AC006978.1, Length 1,234 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006978.1-201ENST00000496846 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
AC006978.1-201ENST00000496846 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
AC006978.1-201ENST00000496846 ABCC9O60706 1549 aa19.37■□□□□ 0.69
AC006978.1-201ENST00000496846 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
AC006978.1-201ENST00000496846 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
AC006978.1-201ENST00000496846 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
AC006978.1-201ENST00000496846 NACADO15069 1562 aa18.97■□□□□ 0.63
AC006978.1-201ENST00000496846 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
AC006978.1-201ENST00000496846 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
AC006978.1-201ENST00000496846 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
AC006978.1-201ENST00000496846 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
AC006978.1-201ENST00000496846 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
AC006978.1-201ENST00000496846 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
AC006978.1-201ENST00000496846 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
AC006978.1-201ENST00000496846 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
AC006978.1-201ENST00000496846 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
AC006978.1-201ENST00000496846 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
AC006978.1-201ENST00000496846 CECR2Q9BXF3 1484 aa17.65■□□□□ 0.42
AC006978.1-201ENST00000496846 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
AC006978.1-201ENST00000496846 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
AC006978.1-201ENST00000496846 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
AC006978.1-201ENST00000496846 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
AC006978.1-201ENST00000496846 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
AC006978.1-201ENST00000496846 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
AC006978.1-201ENST00000496846 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
AC006978.1-201ENST00000496846 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
AC006978.1-201ENST00000496846 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
AC006978.1-201ENST00000496846 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
AC006978.1-201ENST00000496846 WIZO95785 1651 aa17.28■□□□□ 0.36
AC006978.1-201ENST00000496846 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
AC006978.1-201ENST00000496846 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
AC006978.1-201ENST00000496846 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
AC006978.1-201ENST00000496846 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
AC006978.1-201ENST00000496846 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
AC006978.1-201ENST00000496846 CFTRP13569 1480 aa16.94■□□□□ 0.3
AC006978.1-201ENST00000496846 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
AC006978.1-201ENST00000496846 NESP48681 1621 aa16.81■□□□□ 0.28
AC006978.1-201ENST00000496846 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
AC006978.1-201ENST00000496846 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
AC006978.1-201ENST00000496846 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
AC006978.1-201ENST00000496846 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
AC006978.1-201ENST00000496846 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
AC006978.1-201ENST00000496846 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
AC006978.1-201ENST00000496846 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
AC006978.1-201ENST00000496846 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
AC006978.1-201ENST00000496846 WDR62O43379 1518 aa16.56■□□□□ 0.24
AC006978.1-201ENST00000496846 CUX2O14529 1486 aa16.55■□□□□ 0.24
AC006978.1-201ENST00000496846 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
AC006978.1-201ENST00000496846 WRNQ14191 1432 aaPredicted RBP eCLIP16.52■□□□□ 0.23
AC006978.1-201ENST00000496846 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
AC006978.1-201ENST00000496846 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
AC006978.1-201ENST00000496846 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
AC006978.1-201ENST00000496846 CUX1P39880 1505 aa16.43■□□□□ 0.22
AC006978.1-201ENST00000496846 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
AC006978.1-201ENST00000496846 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
AC006978.1-201ENST00000496846 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
AC006978.1-201ENST00000496846 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
AC006978.1-201ENST00000496846 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
AC006978.1-201ENST00000496846 SOGA1O94964 1423 aa16.35■□□□□ 0.21
AC006978.1-201ENST00000496846 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
AC006978.1-201ENST00000496846 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
AC006978.1-201ENST00000496846 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
AC006978.1-201ENST00000496846 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
AC006978.1-201ENST00000496846 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
AC006978.1-201ENST00000496846 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
AC006978.1-201ENST00000496846 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
AC006978.1-201ENST00000496846 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
AC006978.1-201ENST00000496846 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
AC006978.1-201ENST00000496846 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
AC006978.1-201ENST00000496846 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
AC006978.1-201ENST00000496846 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
AC006978.1-201ENST00000496846 EEA1Q15075 1411 aa16.14■□□□□ 0.17
AC006978.1-201ENST00000496846 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.17
AC006978.1-201ENST00000496846 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
AC006978.1-201ENST00000496846 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
AC006978.1-201ENST00000496846 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
AC006978.1-201ENST00000496846 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
AC006978.1-201ENST00000496846 IGF1RP08069 1367 aa16.04■□□□□ 0.16
AC006978.1-201ENST00000496846 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.16
AC006978.1-201ENST00000496846 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
AC006978.1-201ENST00000496846 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
AC006978.1-201ENST00000496846 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
AC006978.1-201ENST00000496846 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
AC006978.1-201ENST00000496846 CUL7Q14999 1698 aa15.98■□□□□ 0.15
AC006978.1-201ENST00000496846 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
AC006978.1-201ENST00000496846 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
AC006978.1-201ENST00000496846 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
AC006978.1-201ENST00000496846 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
AC006978.1-201ENST00000496846 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
AC006978.1-201ENST00000496846 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
AC006978.1-201ENST00000496846 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
AC006978.1-201ENST00000496846 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
AC006978.1-201ENST00000496846 FBLN2P98095 1184 aa15.9■□□□□ 0.14
AC006978.1-201ENST00000496846 NUP160Q12769 1436 aa15.85■□□□□ 0.13
AC006978.1-201ENST00000496846 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
AC006978.1-201ENST00000496846 KIF21BO75037 1637 aa15.81■□□□□ 0.12
AC006978.1-201ENST00000496846 KIAA0586Q9BVV6 1533 aa15.79■□□□□ 0.12
AC006978.1-201ENST00000496846 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
AC006978.1-201ENST00000496846 CHD1O14646 1710 aa15.77■□□□□ 0.12
AC006978.1-201ENST00000496846 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 406 ms