RNA–Protein interactions for RNA: ENST00000496834.6

PGAP2-227, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 2 BASIC

Gene PGAP2, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-227ENST00000496834 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3.01
PGAP2-227ENST00000496834 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
PGAP2-227ENST00000496834 ABCC9O60706 1549 aa29.13■■■□□ 2.25
PGAP2-227ENST00000496834 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
PGAP2-227ENST00000496834 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
PGAP2-227ENST00000496834 NACADO15069 1562 aa28.12■■■□□ 2.09
PGAP2-227ENST00000496834 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
PGAP2-227ENST00000496834 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
PGAP2-227ENST00000496834 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
PGAP2-227ENST00000496834 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
PGAP2-227ENST00000496834 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
PGAP2-227ENST00000496834 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
PGAP2-227ENST00000496834 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.95
PGAP2-227ENST00000496834 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
PGAP2-227ENST00000496834 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
PGAP2-227ENST00000496834 DNAJC5BQ9UF47 199 aa26.49■■□□□ 1.83
PGAP2-227ENST00000496834 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
PGAP2-227ENST00000496834 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
PGAP2-227ENST00000496834 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
PGAP2-227ENST00000496834 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
PGAP2-227ENST00000496834 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
PGAP2-227ENST00000496834 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
PGAP2-227ENST00000496834 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
PGAP2-227ENST00000496834 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
PGAP2-227ENST00000496834 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
PGAP2-227ENST00000496834 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
PGAP2-227ENST00000496834 WIZO95785 1651 aa25.83■■□□□ 1.73
PGAP2-227ENST00000496834 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
PGAP2-227ENST00000496834 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
PGAP2-227ENST00000496834 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
PGAP2-227ENST00000496834 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
PGAP2-227ENST00000496834 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
PGAP2-227ENST00000496834 NESP48681 1621 aa25.26■■□□□ 1.63
PGAP2-227ENST00000496834 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
PGAP2-227ENST00000496834 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
PGAP2-227ENST00000496834 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
PGAP2-227ENST00000496834 CFTRP13569 1480 aa25.1■■□□□ 1.61
PGAP2-227ENST00000496834 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
PGAP2-227ENST00000496834 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
PGAP2-227ENST00000496834 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
PGAP2-227ENST00000496834 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
PGAP2-227ENST00000496834 CEP164Q9UPV0 1460 aa24.88■■□□□ 1.57
PGAP2-227ENST00000496834 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
PGAP2-227ENST00000496834 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
PGAP2-227ENST00000496834 CUX2O14529 1486 aa24.71■■□□□ 1.55
PGAP2-227ENST00000496834 WDR62O43379 1518 aa24.67■■□□□ 1.54
PGAP2-227ENST00000496834 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.53
PGAP2-227ENST00000496834 ABCC8Q09428 1581 aa24.58■■□□□ 1.53
PGAP2-227ENST00000496834 TOPBP1Q92547 1522 aa24.55■■□□□ 1.52
PGAP2-227ENST00000496834 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
PGAP2-227ENST00000496834 CUX1P39880 1505 aa24.44■■□□□ 1.5
PGAP2-227ENST00000496834 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.59e-6■■■■■ 50.1
PGAP2-227ENST00000496834 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
PGAP2-227ENST00000496834 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
PGAP2-227ENST00000496834 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
PGAP2-227ENST00000496834 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
PGAP2-227ENST00000496834 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
PGAP2-227ENST00000496834 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
PGAP2-227ENST00000496834 SOGA1O94964 1423 aa24.3■■□□□ 1.48
PGAP2-227ENST00000496834 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
PGAP2-227ENST00000496834 TARBP1Q13395 1621 aaKnown RBP24.25■■□□□ 1.47
PGAP2-227ENST00000496834 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
PGAP2-227ENST00000496834 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
PGAP2-227ENST00000496834 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
PGAP2-227ENST00000496834 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
PGAP2-227ENST00000496834 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
PGAP2-227ENST00000496834 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PGAP2-227ENST00000496834 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
PGAP2-227ENST00000496834 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
PGAP2-227ENST00000496834 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
PGAP2-227ENST00000496834 GRIN2BQ13224 1484 aa23.96■■□□□ 1.43
PGAP2-227ENST00000496834 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
PGAP2-227ENST00000496834 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
PGAP2-227ENST00000496834 KIF27Q86VH2 1401 aa23.89■■□□□ 1.42
PGAP2-227ENST00000496834 FBLN2P98095 1184 aa23.89■■□□□ 1.41
PGAP2-227ENST00000496834 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
PGAP2-227ENST00000496834 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
PGAP2-227ENST00000496834 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
PGAP2-227ENST00000496834 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
PGAP2-227ENST00000496834 CHD1O14646 1710 aa23.8■■□□□ 1.4
PGAP2-227ENST00000496834 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
PGAP2-227ENST00000496834 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
PGAP2-227ENST00000496834 IGF1RP08069 1367 aa23.75■■□□□ 1.39
PGAP2-227ENST00000496834 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
PGAP2-227ENST00000496834 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PGAP2-227ENST00000496834 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
PGAP2-227ENST00000496834 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
PGAP2-227ENST00000496834 CUL7Q14999 1698 aa23.67■■□□□ 1.38
PGAP2-227ENST00000496834 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
PGAP2-227ENST00000496834 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
PGAP2-227ENST00000496834 EEA1Q15075 1411 aa23.59■■□□□ 1.37
PGAP2-227ENST00000496834 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
PGAP2-227ENST00000496834 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
PGAP2-227ENST00000496834 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
PGAP2-227ENST00000496834 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
PGAP2-227ENST00000496834 NUP160Q12769 1436 aa23.5■■□□□ 1.35
PGAP2-227ENST00000496834 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
PGAP2-227ENST00000496834 PRXQ9BXM0 1461 aa23.45■■□□□ 1.34
PGAP2-227ENST00000496834 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
PGAP2-227ENST00000496834 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms