RNA–Protein interactions for RNA: ENST00000496813.5

RPS18-237, Transcript of ribosomal protein S18, humanhuman

TSL 2

Gene RPS18, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-237ENST00000496813 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
RPS18-237ENST00000496813 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
RPS18-237ENST00000496813 ABCC9O60706 1549 aa19.81■□□□□ 0.76
RPS18-237ENST00000496813 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
RPS18-237ENST00000496813 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
RPS18-237ENST00000496813 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
RPS18-237ENST00000496813 NACADO15069 1562 aa19.44■□□□□ 0.7
RPS18-237ENST00000496813 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RPS18-237ENST00000496813 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
RPS18-237ENST00000496813 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
RPS18-237ENST00000496813 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
RPS18-237ENST00000496813 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
RPS18-237ENST00000496813 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
RPS18-237ENST00000496813 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
RPS18-237ENST00000496813 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
RPS18-237ENST00000496813 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
RPS18-237ENST00000496813 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
RPS18-237ENST00000496813 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
RPS18-237ENST00000496813 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
RPS18-237ENST00000496813 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
RPS18-237ENST00000496813 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
RPS18-237ENST00000496813 SMARCA2P51531 1590 aa18■□□□□ 0.47
RPS18-237ENST00000496813 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
RPS18-237ENST00000496813 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
RPS18-237ENST00000496813 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
RPS18-237ENST00000496813 WIZO95785 1651 aa17.9■□□□□ 0.46
RPS18-237ENST00000496813 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
RPS18-237ENST00000496813 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
RPS18-237ENST00000496813 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
RPS18-237ENST00000496813 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
RPS18-237ENST00000496813 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
RPS18-237ENST00000496813 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
RPS18-237ENST00000496813 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
RPS18-237ENST00000496813 CFTRP13569 1480 aa17.4■□□□□ 0.38
RPS18-237ENST00000496813 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
RPS18-237ENST00000496813 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
RPS18-237ENST00000496813 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
RPS18-237ENST00000496813 NESP48681 1621 aa17.25■□□□□ 0.35
RPS18-237ENST00000496813 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
RPS18-237ENST00000496813 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
RPS18-237ENST00000496813 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
RPS18-237ENST00000496813 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
RPS18-237ENST00000496813 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
RPS18-237ENST00000496813 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.325e-25■□□□□ 8.1
RPS18-237ENST00000496813 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
RPS18-237ENST00000496813 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RPS18-237ENST00000496813 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
RPS18-237ENST00000496813 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
RPS18-237ENST00000496813 CUX1P39880 1505 aa16.96■□□□□ 0.3
RPS18-237ENST00000496813 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
RPS18-237ENST00000496813 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
RPS18-237ENST00000496813 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
RPS18-237ENST00000496813 WDR62O43379 1518 aa16.95■□□□□ 0.3
RPS18-237ENST00000496813 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
RPS18-237ENST00000496813 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
RPS18-237ENST00000496813 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
RPS18-237ENST00000496813 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
RPS18-237ENST00000496813 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
RPS18-237ENST00000496813 CUX2O14529 1486 aa16.81■□□□□ 0.28
RPS18-237ENST00000496813 SOGA1O94964 1423 aa16.79■□□□□ 0.28
RPS18-237ENST00000496813 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
RPS18-237ENST00000496813 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
RPS18-237ENST00000496813 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RPS18-237ENST00000496813 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
RPS18-237ENST00000496813 EEA1Q15075 1411 aa16.71■□□□□ 0.27
RPS18-237ENST00000496813 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
RPS18-237ENST00000496813 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
RPS18-237ENST00000496813 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
RPS18-237ENST00000496813 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
RPS18-237ENST00000496813 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
RPS18-237ENST00000496813 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
RPS18-237ENST00000496813 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
RPS18-237ENST00000496813 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
RPS18-237ENST00000496813 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
RPS18-237ENST00000496813 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
RPS18-237ENST00000496813 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.243e-21■■■■■ 65.8
RPS18-237ENST00000496813 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
RPS18-237ENST00000496813 IGF1RP08069 1367 aa16.54■□□□□ 0.24
RPS18-237ENST00000496813 CUL7Q14999 1698 aa16.5■□□□□ 0.23
RPS18-237ENST00000496813 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
RPS18-237ENST00000496813 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
RPS18-237ENST00000496813 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
RPS18-237ENST00000496813 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
RPS18-237ENST00000496813 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
RPS18-237ENST00000496813 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RPS18-237ENST00000496813 KIF21BO75037 1637 aa16.43■□□□□ 0.22
RPS18-237ENST00000496813 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
RPS18-237ENST00000496813 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
RPS18-237ENST00000496813 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
RPS18-237ENST00000496813 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
RPS18-237ENST00000496813 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
RPS18-237ENST00000496813 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
RPS18-237ENST00000496813 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
RPS18-237ENST00000496813 FBLN2P98095 1184 aa16.27■□□□□ 0.2
RPS18-237ENST00000496813 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
RPS18-237ENST00000496813 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
RPS18-237ENST00000496813 NUP160Q12769 1436 aa16.26■□□□□ 0.19
RPS18-237ENST00000496813 CHD1O14646 1710 aa16.24■□□□□ 0.19
RPS18-237ENST00000496813 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
RPS18-237ENST00000496813 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms