RNA–Protein interactions for RNA: ENST00000496813.5

RPS18-237, Transcript of ribosomal protein S18, humanhuman

TSL 2

Gene RPS18, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-237ENST00000496813 EFTUD2Q15029 972 aaKnown RBP eCLIP9.91□□□□□ -0.823e-19■■■■■ 79.2
RPS18-237ENST00000496813 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.243e-21■■■■■ 65.8
RPS18-237ENST00000496813 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.022e-11■■■■■ 51.6
RPS18-237ENST00000496813 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.02□□□□□ -0.811e-7■■■■■ 45.1
RPS18-237ENST00000496813 SF3A3Q12874 501 aaKnown RBP eCLIP9.47□□□□□ -0.891e-12■■■■■ 39.1
RPS18-237ENST00000496813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.74e-8■■■■■ 32.6
RPS18-237ENST00000496813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.81□□□□□ -0.683e-45■■■■■ 32.6
RPS18-237ENST00000496813 RBM22Q9NW64 420 aaKnown RBP eCLIP10.22□□□□□ -0.771e-7■■■■■ 30.3
RPS18-237ENST00000496813 U2AF2P26368 475 aaKnown RBP eCLIP11.53□□□□□ -0.561e-9■■■■■ 28.9
RPS18-237ENST00000496813 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.81□□□□□ -0.681e-12■■■■■ 28.4
RPS18-237ENST00000496813 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.566e-11■■■■□ 26.1
RPS18-237ENST00000496813 NCBP2P52298 156 aaKnown RBP eCLIP9.41□□□□□ -0.97e-29■■■■□ 23.8
RPS18-237ENST00000496813 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.621e-19■■■■□ 22.7
RPS18-237ENST00000496813 HNRNPMP52272 730 aaKnown RBP eCLIP15.16■□□□□ 0.023e-8■■■■□ 22.6
RPS18-237ENST00000496813 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.543e-71■■■■□ 21.3
RPS18-237ENST00000496813 SRSF9Q13242 221 aaKnown RBP eCLIP6.45□□□□□ -1.388e-7■■■■□ 19.7
RPS18-237ENST00000496813 SF3B4Q15427 424 aaKnown RBP eCLIP9.06□□□□□ -0.968e-11■■■■□ 19.4
RPS18-237ENST00000496813 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.141e-323■■■□□ 18
RPS18-237ENST00000496813 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.168e-8■■■□□ 17.7
RPS18-237ENST00000496813 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -17e-12■■■□□ 17
RPS18-237ENST00000496813 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.41□□□□□ -0.98e-6■■■□□ 14.7
RPS18-237ENST00000496813 LARP4Q71RC2 724 aaKnown RBP eCLIP9.58□□□□□ -0.881e-20■■□□□ 13.8
RPS18-237ENST00000496813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.19□□□□□ -1.14e-12■■□□□ 13.1
RPS18-237ENST00000496813 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.691e-8■■□□□ 13.1
RPS18-237ENST00000496813 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.532e-26■■□□□ 12.6
RPS18-237ENST00000496813 AKAP1Q92667 903 aaKnown RBP eCLIP8.7□□□□□ -1.025e-7■■□□□ 12.5
RPS18-237ENST00000496813 CPSF6Q16630 551 aaKnown RBP eCLIP9.63□□□□□ -0.879e-6■■□□□ 12.5
RPS18-237ENST00000496813 KHSRPQ92945 711 aaKnown RBP eCLIP10.51□□□□□ -0.734e-7■■□□□ 12.2
RPS18-237ENST00000496813 DDX3XO00571 662 aaKnown RBP eCLIP10.63□□□□□ -0.717e-13■■□□□ 11.9
RPS18-237ENST00000496813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.13□□□□□ -0.955e-19■□□□□ 11.3
RPS18-237ENST00000496813 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.478e-23■□□□□ 11
RPS18-237ENST00000496813 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.53□□□□□ -0.881e-323■□□□□ 10.8
RPS18-237ENST00000496813 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.893e-54■□□□□ 10
RPS18-237ENST00000496813 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.87e-8■□□□□ 9.9
RPS18-237ENST00000496813 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.59□□□□□ -0.874e-6■□□□□ 9.9
RPS18-237ENST00000496813 DDX6P26196 483 aaKnown RBP eCLIP10.51□□□□□ -0.738e-38■□□□□ 9.8
RPS18-237ENST00000496813 RPS3P23396 243 aaKnown RBP eCLIP9.96□□□□□ -0.826e-14■□□□□ 9.7
RPS18-237ENST00000496813 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.75e-18■□□□□ 9.1
RPS18-237ENST00000496813 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.325e-25■□□□□ 8.1
Retrieved 39 of 39 RNA–protein pairs in 12.1 ms