RNA–Protein interactions for RNA: ENST00000496808.1

NLK-202, Transcript of nemo like kinase, humanhuman

TSL 2

Gene NLK, Length 1,702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-202ENST00000496808 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
NLK-202ENST00000496808 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
NLK-202ENST00000496808 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
NLK-202ENST00000496808 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
NLK-202ENST00000496808 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
NLK-202ENST00000496808 FOXD1Q16676 465 aa12.92□□□□□ -0.34
NLK-202ENST00000496808 MSH5O43196 834 aa12.6□□□□□ -0.39
NLK-202ENST00000496808 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
NLK-202ENST00000496808 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
NLK-202ENST00000496808 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
NLK-202ENST00000496808 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
NLK-202ENST00000496808 ADRA2BP18089 450 aa11.21□□□□□ -0.62
NLK-202ENST00000496808 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
NLK-202ENST00000496808 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
NLK-202ENST00000496808 DMRT2Q9Y5R5 561 aa10.78□□□□□ -0.68
NLK-202ENST00000496808 POTEHQ6S545 545 aa10.72□□□□□ -0.69
NLK-202ENST00000496808 ABCC9O60706 1549 aa10.72□□□□□ -0.69
NLK-202ENST00000496808 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
NLK-202ENST00000496808 MAPK8IP2Q13387 824 aaPredicted RBP10.57□□□□□ -0.72
NLK-202ENST00000496808 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.74
NLK-202ENST00000496808 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
NLK-202ENST00000496808 SCAF1Q9H7N4 1312 aaKnown RBP10.41□□□□□ -0.74
NLK-202ENST00000496808 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
NLK-202ENST00000496808 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
NLK-202ENST00000496808 NACADO15069 1562 aa10.29□□□□□ -0.76
NLK-202ENST00000496808 MYO15BQ96JP2 1530 aa10.18□□□□□ -0.78
NLK-202ENST00000496808 ZCCHC6Q5VYS8 1495 aaKnown RBP10.15□□□□□ -0.79
NLK-202ENST00000496808 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
NLK-202ENST00000496808 PABPN1Q86U42 306 aaKnown RBP eCLIP10.01□□□□□ -0.81
NLK-202ENST00000496808 UNC13AQ9UPW8 1703 aa9.98□□□□□ -0.81
NLK-202ENST00000496808 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
NLK-202ENST00000496808 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
NLK-202ENST00000496808 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
NLK-202ENST00000496808 BICRAQ9NZM4 1560 aa9.88□□□□□ -0.83
NLK-202ENST00000496808 DNAJC5BQ9UF47 199 aa9.87□□□□□ -0.83
NLK-202ENST00000496808 EIF4G1Q04637 1599 aaKnown RBP9.71□□□□□ -0.86
NLK-202ENST00000496808 CC2D2AQ9P2K1 1620 aa9.67□□□□□ -0.86
NLK-202ENST00000496808 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
NLK-202ENST00000496808 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.86
NLK-202ENST00000496808 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
NLK-202ENST00000496808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.88
NLK-202ENST00000496808 DSG3P32926 999 aa9.56□□□□□ -0.88
NLK-202ENST00000496808 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
NLK-202ENST00000496808 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
NLK-202ENST00000496808 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
NLK-202ENST00000496808 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
NLK-202ENST00000496808 NCAPD3P42695 1498 aa9.46□□□□□ -0.89
NLK-202ENST00000496808 CAPN15O75808 1086 aa9.45□□□□□ -0.9
NLK-202ENST00000496808 ATAD2BQ9ULI0 1458 aa9.45□□□□□ -0.9
NLK-202ENST00000496808 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
NLK-202ENST00000496808 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
NLK-202ENST00000496808 PPP4R3CPQ6ZMV5 832 aa9.41□□□□□ -0.9
NLK-202ENST00000496808 CHRDL2Q6WN34 429 aa9.39□□□□□ -0.91
NLK-202ENST00000496808 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
NLK-202ENST00000496808 PEG3Q9GZU2 1588 aa9.38□□□□□ -0.91
NLK-202ENST00000496808 ERCC6Q03468 1493 aa9.33□□□□□ -0.92
NLK-202ENST00000496808 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
NLK-202ENST00000496808 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
NLK-202ENST00000496808 WIZO95785 1651 aa9.29□□□□□ -0.92
NLK-202ENST00000496808 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.93
NLK-202ENST00000496808 RBM42Q9BTD8 480 aaKnown RBP9.27□□□□□ -0.93
NLK-202ENST00000496808 LAMC3Q9Y6N6 1575 aa9.26□□□□□ -0.93
NLK-202ENST00000496808 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
NLK-202ENST00000496808 TOP2AP11388 1531 aaKnown RBP9.22□□□□□ -0.93
NLK-202ENST00000496808 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.93
NLK-202ENST00000496808 NESP48681 1621 aa9.21□□□□□ -0.94
NLK-202ENST00000496808 CUX2O14529 1486 aa9.21□□□□□ -0.94
NLK-202ENST00000496808 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
NLK-202ENST00000496808 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
NLK-202ENST00000496808 CFTRP13569 1480 aa9.12□□□□□ -0.95
NLK-202ENST00000496808 KIF21AQ7Z4S6 1674 aa9.11□□□□□ -0.95
NLK-202ENST00000496808 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
NLK-202ENST00000496808 FANCD2Q9BXW9 1451 aa9.1□□□□□ -0.95
NLK-202ENST00000496808 ABCB7O75027 752 aa9.1□□□□□ -0.95
NLK-202ENST00000496808 CCDC88BA6NC98 1476 aa9.1□□□□□ -0.95
NLK-202ENST00000496808 MRC2Q9UBG0 1479 aa9.1□□□□□ -0.95
NLK-202ENST00000496808 HAX1O00165 279 aa9.08□□□□□ -0.96
NLK-202ENST00000496808 THOC2Q8NI27 1593 aaKnown RBP9.08□□□□□ -0.96
NLK-202ENST00000496808 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
NLK-202ENST00000496808 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
NLK-202ENST00000496808 WDR62O43379 1518 aa9.03□□□□□ -0.96
NLK-202ENST00000496808 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
NLK-202ENST00000496808 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
NLK-202ENST00000496808 APLP2Q06481 763 aa9□□□□□ -0.97
NLK-202ENST00000496808 LHX8Q68G74 356 aa8.99□□□□□ -0.97
NLK-202ENST00000496808 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.98
NLK-202ENST00000496808 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
NLK-202ENST00000496808 DNMBPQ6XZF7 1577 aa8.93□□□□□ -0.98
NLK-202ENST00000496808 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
NLK-202ENST00000496808 TOPBP1Q92547 1522 aa8.93□□□□□ -0.98
NLK-202ENST00000496808 PIP4P2Q8N4L2 257 aa8.92□□□□□ -0.98
NLK-202ENST00000496808 OSCARQ8IYS5 282 aa8.86□□□□□ -0.99
NLK-202ENST00000496808 SOGA1O94964 1423 aa8.86□□□□□ -0.99
NLK-202ENST00000496808 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
NLK-202ENST00000496808 NCBP3Q53F19 620 aaKnown RBP8.84□□□□□ -0.99
NLK-202ENST00000496808 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
NLK-202ENST00000496808 FBLN2P98095 1184 aa8.82□□□□□ -1
NLK-202ENST00000496808 WDR97A6NE52 1622 aa8.81□□□□□ -1
NLK-202ENST00000496808 EIF4G3O43432 1585 aaKnown RBP8.81□□□□□ -1
NLK-202ENST00000496808 CUX1P39880 1505 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms