RNA–Protein interactions for RNA: ENST00000496746.5

YIF1A-210, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 667 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-210ENST00000496746 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
YIF1A-210ENST00000496746 ABCC9O60706 1549 aa33.57■■■□□ 2.96
YIF1A-210ENST00000496746 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
YIF1A-210ENST00000496746 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
YIF1A-210ENST00000496746 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
YIF1A-210ENST00000496746 NACADO15069 1562 aa31.4■■■□□ 2.62
YIF1A-210ENST00000496746 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
YIF1A-210ENST00000496746 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
YIF1A-210ENST00000496746 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
YIF1A-210ENST00000496746 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
YIF1A-210ENST00000496746 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
YIF1A-210ENST00000496746 ZCCHC6Q5VYS8 1495 aaKnown RBP30.37■■■□□ 2.45
YIF1A-210ENST00000496746 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
YIF1A-210ENST00000496746 DCAF1Q9Y4B6 1507 aa30.33■■■□□ 2.45
YIF1A-210ENST00000496746 CC2D2AQ9P2K1 1620 aa30.29■■■□□ 2.44
YIF1A-210ENST00000496746 CECR2Q9BXF3 1484 aa30.27■■■□□ 2.44
YIF1A-210ENST00000496746 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
YIF1A-210ENST00000496746 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
YIF1A-210ENST00000496746 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
YIF1A-210ENST00000496746 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
YIF1A-210ENST00000496746 CUX2O14529 1486 aa29.06■■■□□ 2.24
YIF1A-210ENST00000496746 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
YIF1A-210ENST00000496746 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
YIF1A-210ENST00000496746 NESP48681 1621 aa28.76■■■□□ 2.2
YIF1A-210ENST00000496746 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
YIF1A-210ENST00000496746 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
YIF1A-210ENST00000496746 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
YIF1A-210ENST00000496746 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
YIF1A-210ENST00000496746 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
YIF1A-210ENST00000496746 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
YIF1A-210ENST00000496746 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
YIF1A-210ENST00000496746 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
YIF1A-210ENST00000496746 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
YIF1A-210ENST00000496746 KIF21AQ7Z4S6 1674 aa28.3■■■□□ 2.12
YIF1A-210ENST00000496746 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
YIF1A-210ENST00000496746 CADPSQ9ULU8 1353 aa28.14■■■□□ 2.1
YIF1A-210ENST00000496746 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
YIF1A-210ENST00000496746 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
YIF1A-210ENST00000496746 WDR62O43379 1518 aa28.02■■■□□ 2.08
YIF1A-210ENST00000496746 WIZO95785 1651 aa27.95■■■□□ 2.07
YIF1A-210ENST00000496746 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
YIF1A-210ENST00000496746 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
YIF1A-210ENST00000496746 CFTRP13569 1480 aa27.76■■■□□ 2.03
YIF1A-210ENST00000496746 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
YIF1A-210ENST00000496746 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
YIF1A-210ENST00000496746 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
YIF1A-210ENST00000496746 TOP2AP11388 1531 aaKnown RBP27.54■■■□□ 2
YIF1A-210ENST00000496746 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
YIF1A-210ENST00000496746 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
YIF1A-210ENST00000496746 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
YIF1A-210ENST00000496746 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
YIF1A-210ENST00000496746 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
YIF1A-210ENST00000496746 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
YIF1A-210ENST00000496746 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
YIF1A-210ENST00000496746 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
YIF1A-210ENST00000496746 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
YIF1A-210ENST00000496746 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.93
YIF1A-210ENST00000496746 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
YIF1A-210ENST00000496746 CYB5RLQ6IPT4 315 aa27.08■■□□□ 1.93
YIF1A-210ENST00000496746 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.922e-8■■■■■ 29.2
YIF1A-210ENST00000496746 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
YIF1A-210ENST00000496746 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
YIF1A-210ENST00000496746 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
YIF1A-210ENST00000496746 CHD1O14646 1710 aa26.99■■□□□ 1.91
YIF1A-210ENST00000496746 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
YIF1A-210ENST00000496746 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
YIF1A-210ENST00000496746 FBLN2P98095 1184 aa26.88■■□□□ 1.89
YIF1A-210ENST00000496746 TRHP20396 242 aaPredicted RBP26.85■■□□□ 1.89
YIF1A-210ENST00000496746 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
YIF1A-210ENST00000496746 SOGA1O94964 1423 aa26.8■■□□□ 1.88
YIF1A-210ENST00000496746 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
YIF1A-210ENST00000496746 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
YIF1A-210ENST00000496746 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
YIF1A-210ENST00000496746 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
YIF1A-210ENST00000496746 CUX1P39880 1505 aa26.65■■□□□ 1.86
YIF1A-210ENST00000496746 CHMP7Q8WUX9 453 aaPredicted RBP26.63■■□□□ 1.85
YIF1A-210ENST00000496746 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
YIF1A-210ENST00000496746 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
YIF1A-210ENST00000496746 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
YIF1A-210ENST00000496746 SYNJ2O15056 1496 aa26.56■■□□□ 1.84
YIF1A-210ENST00000496746 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
YIF1A-210ENST00000496746 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
YIF1A-210ENST00000496746 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
YIF1A-210ENST00000496746 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
YIF1A-210ENST00000496746 ERCC6L2Q5T890 1561 aa26.34■■□□□ 1.81
YIF1A-210ENST00000496746 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
YIF1A-210ENST00000496746 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
YIF1A-210ENST00000496746 NUP160Q12769 1436 aa26.23■■□□□ 1.79
YIF1A-210ENST00000496746 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
YIF1A-210ENST00000496746 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
YIF1A-210ENST00000496746 WRNQ14191 1432 aaPredicted RBP eCLIP26.15■■□□□ 1.78
YIF1A-210ENST00000496746 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
YIF1A-210ENST00000496746 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
YIF1A-210ENST00000496746 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
YIF1A-210ENST00000496746 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
YIF1A-210ENST00000496746 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
YIF1A-210ENST00000496746 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
YIF1A-210ENST00000496746 KIF13AQ9H1H9 1805 aa26■■□□□ 1.75
YIF1A-210ENST00000496746 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
YIF1A-210ENST00000496746 JPH4Q96JJ6 628 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms