RNA–Protein interactions for RNA: ENST00000496720.1

PLXNB2-212, Transcript of plexin B2, humanhuman

TSL 3

Gene PLXNB2, Length 913 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB2-212ENST00000496720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.48■□□□□ 0.392e-11■■■■□ 24.1
PLXNB2-212ENST00000496720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.16■□□□□ 0.349e-10■■■■■ 79.8
PLXNB2-212ENST00000496720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.541e-9■■■□□ 16.9
PLXNB2-212ENST00000496720 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.232e-9■■□□□ 13.1
PLXNB2-212ENST00000496720 SF3A3Q12874 501 aaKnown RBP eCLIP16.22■□□□□ 0.192e-9■■□□□ 14
PLXNB2-212ENST00000496720 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.474e-9■■□□□ 12.5
PLXNB2-212ENST00000496720 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.465e-9■■□□□ 11.6
PLXNB2-212ENST00000496720 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.843e-8■■■□□ 18.6
PLXNB2-212ENST00000496720 DDX6P26196 483 aaKnown RBP eCLIP17.4■□□□□ 0.385e-8■■■■□ 23.4
PLXNB2-212ENST00000496720 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.6■□□□□ 0.419e-8■■■■□ 21.8
PLXNB2-212ENST00000496720 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■□□□ 11.4
PLXNB2-212ENST00000496720 RBM22Q9NW64 420 aaKnown RBP eCLIP17.13■□□□□ 0.331e-7■■■□□ 14.8
PLXNB2-212ENST00000496720 GTF2F1P35269 517 aaKnown RBP eCLIP17.42■□□□□ 0.381e-7■■■■□ 24
PLXNB2-212ENST00000496720 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.53■□□□□ 0.561e-7■■■■□ 23.8
PLXNB2-212ENST00000496720 EFTUD2Q15029 972 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■■■■ 35.2
PLXNB2-212ENST00000496720 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■■□□□ 14.3
PLXNB2-212ENST00000496720 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.172e-7■■■■□ 23.3
PLXNB2-212ENST00000496720 PRPF4O43172 522 aaKnown RBP eCLIP16.64■□□□□ 0.253e-7■■■■□ 22
PLXNB2-212ENST00000496720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.59□□□□□ -0.233e-7■■■□□ 17.6
PLXNB2-212ENST00000496720 RBM5P52756 815 aaKnown RBP eCLIP19.95■□□□□ 0.786e-7■■■■□ 24.8
PLXNB2-212ENST00000496720 EWSR1Q01844 656 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■■■□ 25.8
PLXNB2-212ENST00000496720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.06■□□□□ 0.487e-7■■■■■ 143.3
PLXNB2-212ENST00000496720 SF3B4Q15427 424 aaKnown RBP eCLIP14.89□□□□□ -0.037e-7■■■□□ 15.1
PLXNB2-212ENST00000496720 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 21e-6■■■□□ 17.7
PLXNB2-212ENST00000496720 PCBP2Q15366 365 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■■■ 31.3
PLXNB2-212ENST00000496720 SF3B1O75533 1304 aaKnown RBP eCLIP17.84■□□□□ 0.451e-6■■■■□ 23.8
PLXNB2-212ENST00000496720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.66■■□□□ 1.72e-6■■■□□ 16.5
PLXNB2-212ENST00000496720 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.362e-6■■□□□ 12.9
PLXNB2-212ENST00000496720 FXR2P51116 673 aaKnown RBP eCLIP19.02■□□□□ 0.642e-6■■■■□ 24.4
PLXNB2-212ENST00000496720 SMNDC1O75940 238 aaKnown RBP eCLIP14.96□□□□□ -0.014e-6■■□□□ 12.4
PLXNB2-212ENST00000496720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.788e-6■■■□□ 18.6
PLXNB2-212ENST00000496720 SRSF7Q16629 238 aaKnown RBP eCLIP14.03□□□□□ -0.169e-6■■■■□ 21.6
Retrieved 32 of 32 RNA–protein pairs in 8.4 ms