RNA–Protein interactions for RNA: ENST00000496718.1

PGD-209, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 2

Gene PGD, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-209ENST00000496718 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
PGD-209ENST00000496718 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
PGD-209ENST00000496718 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
PGD-209ENST00000496718 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
PGD-209ENST00000496718 ABCC9O60706 1549 aa23.95■■□□□ 1.43
PGD-209ENST00000496718 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
PGD-209ENST00000496718 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
PGD-209ENST00000496718 NACADO15069 1562 aa23.66■■□□□ 1.38
PGD-209ENST00000496718 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
PGD-209ENST00000496718 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
PGD-209ENST00000496718 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
PGD-209ENST00000496718 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
PGD-209ENST00000496718 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
PGD-209ENST00000496718 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
PGD-209ENST00000496718 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
PGD-209ENST00000496718 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
PGD-209ENST00000496718 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
PGD-209ENST00000496718 RSF1Q96T23 1441 aaPredicted RBP22.36■■□□□ 1.17
PGD-209ENST00000496718 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
PGD-209ENST00000496718 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
PGD-209ENST00000496718 WIZO95785 1651 aa22.11■■□□□ 1.13
PGD-209ENST00000496718 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
PGD-209ENST00000496718 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
PGD-209ENST00000496718 SMARCA2P51531 1590 aa22■■□□□ 1.11
PGD-209ENST00000496718 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
PGD-209ENST00000496718 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
PGD-209ENST00000496718 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
PGD-209ENST00000496718 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
PGD-209ENST00000496718 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
PGD-209ENST00000496718 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
PGD-209ENST00000496718 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
PGD-209ENST00000496718 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
PGD-209ENST00000496718 CFTRP13569 1480 aa21.26■□□□□ 0.99
PGD-209ENST00000496718 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
PGD-209ENST00000496718 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
PGD-209ENST00000496718 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
PGD-209ENST00000496718 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
PGD-209ENST00000496718 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
PGD-209ENST00000496718 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
PGD-209ENST00000496718 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
PGD-209ENST00000496718 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
PGD-209ENST00000496718 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
PGD-209ENST00000496718 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
PGD-209ENST00000496718 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
PGD-209ENST00000496718 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
PGD-209ENST00000496718 NESP48681 1621 aa20.94■□□□□ 0.94
PGD-209ENST00000496718 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
PGD-209ENST00000496718 CUX1P39880 1505 aa20.87■□□□□ 0.93
PGD-209ENST00000496718 EEA1Q15075 1411 aa20.86■□□□□ 0.93
PGD-209ENST00000496718 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
PGD-209ENST00000496718 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
PGD-209ENST00000496718 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
PGD-209ENST00000496718 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
PGD-209ENST00000496718 SOGA1O94964 1423 aa20.71■□□□□ 0.91
PGD-209ENST00000496718 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
PGD-209ENST00000496718 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
PGD-209ENST00000496718 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
PGD-209ENST00000496718 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
PGD-209ENST00000496718 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
PGD-209ENST00000496718 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
PGD-209ENST00000496718 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
PGD-209ENST00000496718 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
PGD-209ENST00000496718 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
PGD-209ENST00000496718 WDR62O43379 1518 aa20.55■□□□□ 0.88
PGD-209ENST00000496718 CUX2O14529 1486 aa20.55■□□□□ 0.88
PGD-209ENST00000496718 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
PGD-209ENST00000496718 KIF21BO75037 1637 aa20.53■□□□□ 0.88
PGD-209ENST00000496718 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
PGD-209ENST00000496718 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
PGD-209ENST00000496718 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
PGD-209ENST00000496718 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
PGD-209ENST00000496718 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
PGD-209ENST00000496718 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
PGD-209ENST00000496718 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
PGD-209ENST00000496718 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
PGD-209ENST00000496718 EHMT2Q96KQ7 1210 aa20.39■□□□□ 0.85
PGD-209ENST00000496718 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
PGD-209ENST00000496718 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
PGD-209ENST00000496718 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
PGD-209ENST00000496718 IGF1RP08069 1367 aa20.35■□□□□ 0.85
PGD-209ENST00000496718 CUL7Q14999 1698 aa20.35■□□□□ 0.85
PGD-209ENST00000496718 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
PGD-209ENST00000496718 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
PGD-209ENST00000496718 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
PGD-209ENST00000496718 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
PGD-209ENST00000496718 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
PGD-209ENST00000496718 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
PGD-209ENST00000496718 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
PGD-209ENST00000496718 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
PGD-209ENST00000496718 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
PGD-209ENST00000496718 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
PGD-209ENST00000496718 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
PGD-209ENST00000496718 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
PGD-209ENST00000496718 CLIP1P30622 1438 aa20.13■□□□□ 0.81
PGD-209ENST00000496718 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
PGD-209ENST00000496718 CTTNBP2Q8WZ74 1663 aa20.08■□□□□ 0.81
PGD-209ENST00000496718 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
PGD-209ENST00000496718 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
PGD-209ENST00000496718 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
PGD-209ENST00000496718 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms