RNA–Protein interactions for RNA: ENST00000496238.5

POLR1B-214, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 587 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-214ENST00000496238 NISCHQ9Y2I1 1504 aa45.91■■■■■ 4.94
POLR1B-214ENST00000496238 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
POLR1B-214ENST00000496238 ABCC9O60706 1549 aa41.08■■■■■ 4.17
POLR1B-214ENST00000496238 RB1CC1Q8TDY2 1594 aa39.15■■■■□ 3.86
POLR1B-214ENST00000496238 NACADO15069 1562 aa38.91■■■■□ 3.82
POLR1B-214ENST00000496238 DCAF8L2P0C7V8 631 aa38.62■■■■□ 3.77
POLR1B-214ENST00000496238 DNAJC5BQ9UF47 199 aa38.48■■■■□ 3.75
POLR1B-214ENST00000496238 MYO15BQ96JP2 1530 aa38.43■■■■□ 3.74
POLR1B-214ENST00000496238 PABPN1Q86U42 306 aaKnown RBP eCLIP38.24■■■■□ 3.71
POLR1B-214ENST00000496238 UNC13AQ9UPW8 1703 aa38.22■■■■□ 3.71
POLR1B-214ENST00000496238 ZCCHC6Q5VYS8 1495 aaKnown RBP38.08■■■■□ 3.69
POLR1B-214ENST00000496238 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
POLR1B-214ENST00000496238 DCAF1Q9Y4B6 1507 aa37.96■■■■□ 3.67
POLR1B-214ENST00000496238 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
POLR1B-214ENST00000496238 SCRIBQ14160 1630 aa37.48■■■■□ 3.59
POLR1B-214ENST00000496238 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
POLR1B-214ENST00000496238 EIF4G1Q04637 1599 aaKnown RBP37.08■■■■□ 3.53
POLR1B-214ENST00000496238 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
POLR1B-214ENST00000496238 NCAPD3P42695 1498 aa35.93■■■■□ 3.34
POLR1B-214ENST00000496238 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
POLR1B-214ENST00000496238 SMARCA4P51532 1647 aa35.79■■■■□ 3.32
POLR1B-214ENST00000496238 SMARCA2P51531 1590 aa35.72■■■■□ 3.31
POLR1B-214ENST00000496238 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
POLR1B-214ENST00000496238 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
POLR1B-214ENST00000496238 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
POLR1B-214ENST00000496238 BAZ1BQ9UIG0 1483 aaKnown RBP35.47■■■■□ 3.27
POLR1B-214ENST00000496238 ERCC6Q03468 1493 aa35.46■■■■□ 3.27
POLR1B-214ENST00000496238 CUX2O14529 1486 aa35.41■■■■□ 3.26
POLR1B-214ENST00000496238 MROH2BQ7Z745 1585 aa35.37■■■■□ 3.25
POLR1B-214ENST00000496238 NESP48681 1621 aa35.32■■■■□ 3.24
POLR1B-214ENST00000496238 DNAJC5Q9H3Z4 198 aa35.3■■■■□ 3.24
POLR1B-214ENST00000496238 LAMC3Q9Y6N6 1575 aa35.09■■■■□ 3.21
POLR1B-214ENST00000496238 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
POLR1B-214ENST00000496238 WIZO95785 1651 aa34.92■■■■□ 3.18
POLR1B-214ENST00000496238 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
POLR1B-214ENST00000496238 KIF21AQ7Z4S6 1674 aa34.84■■■■□ 3.17
POLR1B-214ENST00000496238 CADPSQ9ULU8 1353 aa34.83■■■■□ 3.17
POLR1B-214ENST00000496238 RSF1Q96T23 1441 aaPredicted RBP34.67■■■■□ 3.14
POLR1B-214ENST00000496238 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
POLR1B-214ENST00000496238 WDR62O43379 1518 aa34.51■■■■□ 3.12
POLR1B-214ENST00000496238 TOP2AP11388 1531 aaKnown RBP34.51■■■■□ 3.12
POLR1B-214ENST00000496238 CFTRP13569 1480 aa34.46■■■■□ 3.11
POLR1B-214ENST00000496238 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
POLR1B-214ENST00000496238 FANCD2Q9BXW9 1451 aa34.43■■■■□ 3.1
POLR1B-214ENST00000496238 URB2Q14146 1524 aaKnown RBP34.14■■■■□ 3.06
POLR1B-214ENST00000496238 CCDC88BA6NC98 1476 aa34.12■■■■□ 3.05
POLR1B-214ENST00000496238 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
POLR1B-214ENST00000496238 TOPBP1Q92547 1522 aa33.79■■■■□ 3
POLR1B-214ENST00000496238 IFT140Q96RY7 1462 aa33.77■■■■□ 3
POLR1B-214ENST00000496238 OSCARQ8IYS5 282 aa33.77■■■■□ 3
POLR1B-214ENST00000496238 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
POLR1B-214ENST00000496238 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
POLR1B-214ENST00000496238 ZNF608Q9ULD9 1512 aaPredicted RBP33.71■■■□□ 2.99
POLR1B-214ENST00000496238 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
POLR1B-214ENST00000496238 EIF4G3O43432 1585 aaKnown RBP33.52■■■□□ 2.96
POLR1B-214ENST00000496238 TARBP1Q13395 1621 aaKnown RBP33.49■■■□□ 2.95
POLR1B-214ENST00000496238 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
POLR1B-214ENST00000496238 AQRO60306 1485 aaKnown RBP eCLIP33.4■■■□□ 2.944e-6■■■■■ 31
POLR1B-214ENST00000496238 RIMBP3CA6NJZ7 1639 aa33.33■■■□□ 2.93
POLR1B-214ENST00000496238 RIMBP3BA6NNM3 1639 aa33.33■■■□□ 2.93
POLR1B-214ENST00000496238 RIMBP3Q9UFD9 1639 aa33.33■■■□□ 2.93
POLR1B-214ENST00000496238 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
POLR1B-214ENST00000496238 SOGA1O94964 1423 aa33.28■■■□□ 2.92
POLR1B-214ENST00000496238 ARHGEF11O15085 1522 aa33.26■■■□□ 2.91
POLR1B-214ENST00000496238 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
POLR1B-214ENST00000496238 CUX1P39880 1505 aa33.23■■■□□ 2.91
POLR1B-214ENST00000496238 CHD1O14646 1710 aa33.22■■■□□ 2.91
POLR1B-214ENST00000496238 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
POLR1B-214ENST00000496238 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
POLR1B-214ENST00000496238 FBLN2P98095 1184 aa33.12■■■□□ 2.89
POLR1B-214ENST00000496238 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
POLR1B-214ENST00000496238 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
POLR1B-214ENST00000496238 GRIN2BQ13224 1484 aa33■■■□□ 2.87
POLR1B-214ENST00000496238 MAGI1Q96QZ7 1491 aaPredicted RBP33■■■□□ 2.87
POLR1B-214ENST00000496238 CYB5RLQ6IPT4 315 aa32.96■■■□□ 2.87
POLR1B-214ENST00000496238 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
POLR1B-214ENST00000496238 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
POLR1B-214ENST00000496238 CLASP1Q7Z460 1538 aa32.9■■■□□ 2.86
POLR1B-214ENST00000496238 SYNJ2O15056 1496 aa32.89■■■□□ 2.86
POLR1B-214ENST00000496238 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
POLR1B-214ENST00000496238 GAPVD1Q14C86 1478 aa32.88■■■□□ 2.85
POLR1B-214ENST00000496238 SYNJ1O43426 1573 aa32.86■■■□□ 2.85
POLR1B-214ENST00000496238 PBRM1Q86U86 1689 aa32.84■■■□□ 2.85
POLR1B-214ENST00000496238 ABCA5Q8WWZ7 1642 aa32.82■■■□□ 2.84
POLR1B-214ENST00000496238 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
POLR1B-214ENST00000496238 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
POLR1B-214ENST00000496238 BIVM-ERCC5R4GMW8 1640 aa32.7■■■□□ 2.83
POLR1B-214ENST00000496238 GRIN2AQ12879 1464 aa32.58■■■□□ 2.81
POLR1B-214ENST00000496238 ADAMTS12P58397 1594 aa32.57■■■□□ 2.8
POLR1B-214ENST00000496238 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
POLR1B-214ENST00000496238 NUP160Q12769 1436 aa32.49■■■□□ 2.79
POLR1B-214ENST00000496238 FHAD1B1AJZ9 1412 aa32.48■■■□□ 2.79
POLR1B-214ENST00000496238 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
POLR1B-214ENST00000496238 CEP170Q5SW79 1584 aa32.45■■■□□ 2.78
POLR1B-214ENST00000496238 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
POLR1B-214ENST00000496238 SHROOM2Q13796 1616 aa32.32■■■□□ 2.76
POLR1B-214ENST00000496238 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
POLR1B-214ENST00000496238 RUSC2Q8N2Y8 1516 aa32.11■■■□□ 2.73
POLR1B-214ENST00000496238 JPH4Q96JJ6 628 aa32.11■■■□□ 2.73
POLR1B-214ENST00000496238 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms