RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 NISCHQ9Y2I1 1504 aa51.79■■■■■ 5.88
PPM1F-208ENST00000496143 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
PPM1F-208ENST00000496143 ABCC9O60706 1549 aa45.32■■■■■ 4.85
PPM1F-208ENST00000496143 RB1CC1Q8TDY2 1594 aa43.57■■■■■ 4.57
PPM1F-208ENST00000496143 NACADO15069 1562 aa43.47■■■■■ 4.55
PPM1F-208ENST00000496143 DCAF8L2P0C7V8 631 aa43.39■■■■■ 4.54
PPM1F-208ENST00000496143 MYO15BQ96JP2 1530 aa43.17■■■■■ 4.5
PPM1F-208ENST00000496143 ZCCHC6Q5VYS8 1495 aaKnown RBP43.11■■■■■ 4.49
PPM1F-208ENST00000496143 DCAF1Q9Y4B6 1507 aa42.88■■■■■ 4.46
PPM1F-208ENST00000496143 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
PPM1F-208ENST00000496143 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
PPM1F-208ENST00000496143 BICRAQ9NZM4 1560 aa42.15■■■■■ 4.34
PPM1F-208ENST00000496143 SCRIBQ14160 1630 aa42.06■■■■■ 4.32
PPM1F-208ENST00000496143 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
PPM1F-208ENST00000496143 DNAJC5BQ9UF47 199 aa41.69■■■■■ 4.26
PPM1F-208ENST00000496143 EIF4G1Q04637 1599 aaKnown RBP41.12■■■■■ 4.17
PPM1F-208ENST00000496143 CC2D2AQ9P2K1 1620 aa40.98■■■■■ 4.15
PPM1F-208ENST00000496143 CECR2Q9BXF3 1484 aa40.77■■■■■ 4.12
PPM1F-208ENST00000496143 SMARCA4P51532 1647 aa40.23■■■■■ 4.03
PPM1F-208ENST00000496143 BAZ1AQ9NRL2 1556 aaPredicted RBP40.2■■■■■ 4.03
PPM1F-208ENST00000496143 NCAPD3P42695 1498 aa40.1■■■■■ 4.01
PPM1F-208ENST00000496143 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4
PPM1F-208ENST00000496143 SMARCA2P51531 1590 aa40.06■■■■■ 4
PPM1F-208ENST00000496143 HMGXB3Q12766 1538 aa39.9■■■■□ 3.98
PPM1F-208ENST00000496143 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
PPM1F-208ENST00000496143 PEG3Q9GZU2 1588 aa39.85■■■■□ 3.97
PPM1F-208ENST00000496143 BAZ1BQ9UIG0 1483 aaKnown RBP39.77■■■■□ 3.96
PPM1F-208ENST00000496143 WIZO95785 1651 aa39.42■■■■□ 3.9
PPM1F-208ENST00000496143 RSF1Q96T23 1441 aaPredicted RBP39.38■■■■□ 3.89
PPM1F-208ENST00000496143 ERCC6Q03468 1493 aa39.16■■■■□ 3.86
PPM1F-208ENST00000496143 NESP48681 1621 aa39.12■■■■□ 3.85
PPM1F-208ENST00000496143 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
PPM1F-208ENST00000496143 TOP2AP11388 1531 aaKnown RBP39.06■■■■□ 3.84
PPM1F-208ENST00000496143 CADPSQ9ULU8 1353 aa38.93■■■■□ 3.82
PPM1F-208ENST00000496143 PDS5BQ9NTI5 1447 aa38.87■■■■□ 3.81
PPM1F-208ENST00000496143 CUX2O14529 1486 aa38.81■■■■□ 3.8
PPM1F-208ENST00000496143 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
PPM1F-208ENST00000496143 CFTRP13569 1480 aa38.64■■■■□ 3.78
PPM1F-208ENST00000496143 THOC2Q8NI27 1593 aaKnown RBP38.6■■■■□ 3.77
PPM1F-208ENST00000496143 CCDC88BA6NC98 1476 aa38.57■■■■□ 3.76
PPM1F-208ENST00000496143 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
PPM1F-208ENST00000496143 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
PPM1F-208ENST00000496143 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
PPM1F-208ENST00000496143 WDR62O43379 1518 aa38.3■■■■□ 3.72
PPM1F-208ENST00000496143 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
PPM1F-208ENST00000496143 SUPT5HO00267 1087 aaKnown RBP38.25■■■■□ 3.71
PPM1F-208ENST00000496143 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
PPM1F-208ENST00000496143 ABCC8Q09428 1581 aa37.89■■■■□ 3.66
PPM1F-208ENST00000496143 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
PPM1F-208ENST00000496143 DNAJC5Q9H3Z4 198 aa37.8■■■■□ 3.64
PPM1F-208ENST00000496143 DNMBPQ6XZF7 1577 aa37.78■■■■□ 3.64
PPM1F-208ENST00000496143 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
PPM1F-208ENST00000496143 POLA1P09884 1462 aaPredicted RBP37.48■■■■□ 3.59
PPM1F-208ENST00000496143 ZNF608Q9ULD9 1512 aaPredicted RBP37.44■■■■□ 3.58
PPM1F-208ENST00000496143 CUX1P39880 1505 aa37.43■■■■□ 3.58
PPM1F-208ENST00000496143 TARBP1Q13395 1621 aaKnown RBP37.39■■■■□ 3.58
PPM1F-208ENST00000496143 FGD5Q6ZNL6 1462 aa37.37■■■■□ 3.57
PPM1F-208ENST00000496143 SOGA1O94964 1423 aa37.36■■■■□ 3.57
PPM1F-208ENST00000496143 EIF4G3O43432 1585 aaKnown RBP37.31■■■■□ 3.56
PPM1F-208ENST00000496143 RAD54L2Q9Y4B4 1467 aa37.29■■■■□ 3.56
PPM1F-208ENST00000496143 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.552e-6■■■□□ 15.2
PPM1F-208ENST00000496143 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
PPM1F-208ENST00000496143 WRNQ14191 1432 aaPredicted RBP eCLIP37.18■■■■□ 3.54
PPM1F-208ENST00000496143 OSCARQ8IYS5 282 aa37.17■■■■□ 3.54
PPM1F-208ENST00000496143 TDRD9Q8NDG6 1382 aaKnown RBP37.14■■■■□ 3.54
PPM1F-208ENST00000496143 TOP2BQ02880 1626 aa37.09■■■■□ 3.53
PPM1F-208ENST00000496143 BIVM-ERCC5R4GMW8 1640 aa37.07■■■■□ 3.53
PPM1F-208ENST00000496143 SYNJ1O43426 1573 aa37.03■■■■□ 3.52
PPM1F-208ENST00000496143 ABCA10Q8WWZ4 1543 aa37.01■■■■□ 3.52
PPM1F-208ENST00000496143 GRIN2BQ13224 1484 aa36.96■■■■□ 3.51
PPM1F-208ENST00000496143 GAPVD1Q14C86 1478 aa36.92■■■■□ 3.5
PPM1F-208ENST00000496143 SNAPC4Q5SXM2 1469 aa36.9■■■■□ 3.5
PPM1F-208ENST00000496143 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
PPM1F-208ENST00000496143 FBLN2P98095 1184 aa36.88■■■■□ 3.49
PPM1F-208ENST00000496143 ABCA5Q8WWZ7 1642 aa36.85■■■■□ 3.49
PPM1F-208ENST00000496143 CHD1O14646 1710 aa36.85■■■■□ 3.49
PPM1F-208ENST00000496143 PBRM1Q86U86 1689 aa36.8■■■■□ 3.48
PPM1F-208ENST00000496143 CHMP7Q8WUX9 453 aaPredicted RBP36.77■■■■□ 3.48
PPM1F-208ENST00000496143 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
PPM1F-208ENST00000496143 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
PPM1F-208ENST00000496143 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
PPM1F-208ENST00000496143 ARHGEF11O15085 1522 aa36.52■■■■□ 3.44
PPM1F-208ENST00000496143 RIMBP3CA6NJZ7 1639 aa36.52■■■■□ 3.44
PPM1F-208ENST00000496143 RIMBP3BA6NNM3 1639 aa36.52■■■■□ 3.44
PPM1F-208ENST00000496143 RIMBP3Q9UFD9 1639 aa36.52■■■■□ 3.44
PPM1F-208ENST00000496143 FHAD1B1AJZ9 1412 aa36.51■■■■□ 3.43
PPM1F-208ENST00000496143 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
PPM1F-208ENST00000496143 CLASP1Q7Z460 1538 aa36.48■■■■□ 3.43
PPM1F-208ENST00000496143 GRIN2AQ12879 1464 aa36.46■■■■□ 3.43
PPM1F-208ENST00000496143 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
PPM1F-208ENST00000496143 NUP160Q12769 1436 aa36.3■■■■□ 3.4
PPM1F-208ENST00000496143 IGF1RP08069 1367 aa36.26■■■■□ 3.39
PPM1F-208ENST00000496143 CEP170Q5SW79 1584 aa36.24■■■■□ 3.39
PPM1F-208ENST00000496143 CUL7Q14999 1698 aa36.22■■■■□ 3.39
PPM1F-208ENST00000496143 CYB5RLQ6IPT4 315 aa36.2■■■■□ 3.39
PPM1F-208ENST00000496143 ARAP1Q96P48 1450 aa36.19■■■■□ 3.38
PPM1F-208ENST00000496143 CARMIL1Q5VZK9 1371 aa36.08■■■■□ 3.37
PPM1F-208ENST00000496143 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
PPM1F-208ENST00000496143 RUSC2Q8N2Y8 1516 aa35.99■■■■□ 3.35
PPM1F-208ENST00000496143 JPH4Q96JJ6 628 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms