RNA–Protein interactions for RNA: ENST00000496070.1

GAREM2-203, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 3

Gene GAREM2, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-203ENST00000496070 NISCHQ9Y2I1 1504 aa32.78■■■□□ 2.84
GAREM2-203ENST00000496070 CCDC180Q9P1Z9 1646 aa28.97■■■□□ 2.23
GAREM2-203ENST00000496070 ABCC9O60706 1549 aa28.35■■■□□ 2.13
GAREM2-203ENST00000496070 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
GAREM2-203ENST00000496070 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
GAREM2-203ENST00000496070 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
GAREM2-203ENST00000496070 NACADO15069 1562 aa27.22■■□□□ 1.95
GAREM2-203ENST00000496070 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
GAREM2-203ENST00000496070 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
GAREM2-203ENST00000496070 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
GAREM2-203ENST00000496070 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
GAREM2-203ENST00000496070 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
GAREM2-203ENST00000496070 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
GAREM2-203ENST00000496070 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
GAREM2-203ENST00000496070 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
GAREM2-203ENST00000496070 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
GAREM2-203ENST00000496070 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
GAREM2-203ENST00000496070 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
GAREM2-203ENST00000496070 SMARCA4P51532 1647 aa25.4■■□□□ 1.66
GAREM2-203ENST00000496070 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
GAREM2-203ENST00000496070 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
GAREM2-203ENST00000496070 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
GAREM2-203ENST00000496070 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
GAREM2-203ENST00000496070 NCAPD3P42695 1498 aa25.13■■□□□ 1.61
GAREM2-203ENST00000496070 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
GAREM2-203ENST00000496070 WIZO95785 1651 aa25.07■■□□□ 1.6
GAREM2-203ENST00000496070 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
GAREM2-203ENST00000496070 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
GAREM2-203ENST00000496070 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
GAREM2-203ENST00000496070 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
GAREM2-203ENST00000496070 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
GAREM2-203ENST00000496070 NESP48681 1621 aa24.59■■□□□ 1.53
GAREM2-203ENST00000496070 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
GAREM2-203ENST00000496070 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
GAREM2-203ENST00000496070 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
GAREM2-203ENST00000496070 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
GAREM2-203ENST00000496070 CFTRP13569 1480 aa24.32■■□□□ 1.48
GAREM2-203ENST00000496070 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
GAREM2-203ENST00000496070 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
GAREM2-203ENST00000496070 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
GAREM2-203ENST00000496070 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
GAREM2-203ENST00000496070 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
GAREM2-203ENST00000496070 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
GAREM2-203ENST00000496070 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
GAREM2-203ENST00000496070 CUX2O14529 1486 aa23.97■■□□□ 1.43
GAREM2-203ENST00000496070 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
GAREM2-203ENST00000496070 WDR62O43379 1518 aa23.93■■□□□ 1.42
GAREM2-203ENST00000496070 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
GAREM2-203ENST00000496070 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
GAREM2-203ENST00000496070 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
GAREM2-203ENST00000496070 CUX1P39880 1505 aa23.73■■□□□ 1.39
GAREM2-203ENST00000496070 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
GAREM2-203ENST00000496070 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
GAREM2-203ENST00000496070 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
GAREM2-203ENST00000496070 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
GAREM2-203ENST00000496070 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
GAREM2-203ENST00000496070 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
GAREM2-203ENST00000496070 SOGA1O94964 1423 aa23.57■■□□□ 1.36
GAREM2-203ENST00000496070 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
GAREM2-203ENST00000496070 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
GAREM2-203ENST00000496070 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
GAREM2-203ENST00000496070 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
GAREM2-203ENST00000496070 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
GAREM2-203ENST00000496070 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
GAREM2-203ENST00000496070 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
GAREM2-203ENST00000496070 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
GAREM2-203ENST00000496070 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
GAREM2-203ENST00000496070 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
GAREM2-203ENST00000496070 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
GAREM2-203ENST00000496070 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
GAREM2-203ENST00000496070 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
GAREM2-203ENST00000496070 FBLN2P98095 1184 aa23.22■■□□□ 1.31
GAREM2-203ENST00000496070 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
GAREM2-203ENST00000496070 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
GAREM2-203ENST00000496070 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
GAREM2-203ENST00000496070 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
GAREM2-203ENST00000496070 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
GAREM2-203ENST00000496070 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
GAREM2-203ENST00000496070 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
GAREM2-203ENST00000496070 CHD1O14646 1710 aa23.09■■□□□ 1.29
GAREM2-203ENST00000496070 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
GAREM2-203ENST00000496070 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
GAREM2-203ENST00000496070 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
GAREM2-203ENST00000496070 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
GAREM2-203ENST00000496070 IGF1RP08069 1367 aa23.02■■□□□ 1.28
GAREM2-203ENST00000496070 ADAMTS12P58397 1594 aa23.02■■□□□ 1.28
GAREM2-203ENST00000496070 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
GAREM2-203ENST00000496070 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
GAREM2-203ENST00000496070 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
GAREM2-203ENST00000496070 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
GAREM2-203ENST00000496070 CUL7Q14999 1698 aa22.89■■□□□ 1.25
GAREM2-203ENST00000496070 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
GAREM2-203ENST00000496070 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
GAREM2-203ENST00000496070 CLASP1Q7Z460 1538 aa22.81■■□□□ 1.24
GAREM2-203ENST00000496070 NUP160Q12769 1436 aa22.8■■□□□ 1.24
GAREM2-203ENST00000496070 RAPGEF2Q9Y4G8 1499 aa22.77■■□□□ 1.24
GAREM2-203ENST00000496070 EEA1Q15075 1411 aa22.76■■□□□ 1.23
GAREM2-203ENST00000496070 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
GAREM2-203ENST00000496070 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
GAREM2-203ENST00000496070 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms