RNA–Protein interactions for RNA: ENST00000495862.1

GABRE-212, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-212ENST00000495862 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
GABRE-212ENST00000495862 CCDC180Q9P1Z9 1646 aa9.56□□□□□ -0.88
GABRE-212ENST00000495862 ABCC9O60706 1549 aa9.54□□□□□ -0.88
GABRE-212ENST00000495862 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
GABRE-212ENST00000495862 RB1CC1Q8TDY2 1594 aa9.09□□□□□ -0.95
GABRE-212ENST00000495862 NACADO15069 1562 aa9.05□□□□□ -0.96
GABRE-212ENST00000495862 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
GABRE-212ENST00000495862 PABPN1Q86U42 306 aaKnown RBP eCLIP9.02□□□□□ -0.97
GABRE-212ENST00000495862 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
GABRE-212ENST00000495862 DCAF1Q9Y4B6 1507 aa8.9□□□□□ -0.98
GABRE-212ENST00000495862 SCRIBQ14160 1630 aa8.9□□□□□ -0.99
GABRE-212ENST00000495862 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
GABRE-212ENST00000495862 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
GABRE-212ENST00000495862 BICRAQ9NZM4 1560 aa8.73□□□□□ -1.01
GABRE-212ENST00000495862 DNAJC5BQ9UF47 199 aa8.71□□□□□ -1.02
GABRE-212ENST00000495862 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
GABRE-212ENST00000495862 CC2D2AQ9P2K1 1620 aa8.55□□□□□ -1.04
GABRE-212ENST00000495862 CECR2Q9BXF3 1484 aa8.53□□□□□ -1.04
GABRE-212ENST00000495862 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
GABRE-212ENST00000495862 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
GABRE-212ENST00000495862 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
GABRE-212ENST00000495862 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
GABRE-212ENST00000495862 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
GABRE-212ENST00000495862 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
GABRE-212ENST00000495862 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
GABRE-212ENST00000495862 WIZO95785 1651 aa8.36□□□□□ -1.07
GABRE-212ENST00000495862 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
GABRE-212ENST00000495862 RSF1Q96T23 1441 aaPredicted RBP8.35□□□□□ -1.07
GABRE-212ENST00000495862 HMGXB3Q12766 1538 aa8.27□□□□□ -1.09
GABRE-212ENST00000495862 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
GABRE-212ENST00000495862 PEG3Q9GZU2 1588 aa8.25□□□□□ -1.09
GABRE-212ENST00000495862 NESP48681 1621 aa8.23□□□□□ -1.09
GABRE-212ENST00000495862 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.1
GABRE-212ENST00000495862 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
GABRE-212ENST00000495862 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
GABRE-212ENST00000495862 PDS5BQ9NTI5 1447 aa8.16□□□□□ -1.1
GABRE-212ENST00000495862 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
GABRE-212ENST00000495862 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
GABRE-212ENST00000495862 KIF21AQ7Z4S6 1674 aa8.08□□□□□ -1.12
GABRE-212ENST00000495862 CFTRP13569 1480 aa8.08□□□□□ -1.12
GABRE-212ENST00000495862 CEP164Q9UPV0 1460 aa8.08□□□□□ -1.12
GABRE-212ENST00000495862 MRC2Q9UBG0 1479 aa8.03□□□□□ -1.12
GABRE-212ENST00000495862 CUX2O14529 1486 aa8□□□□□ -1.13
GABRE-212ENST00000495862 FBLN2P98095 1184 aa7.98□□□□□ -1.13
GABRE-212ENST00000495862 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
GABRE-212ENST00000495862 THOC2Q8NI27 1593 aaKnown RBP7.97□□□□□ -1.13
GABRE-212ENST00000495862 URB2Q14146 1524 aaKnown RBP7.97□□□□□ -1.13
GABRE-212ENST00000495862 TRIM41Q8WV44 630 aa7.95□□□□□ -1.14
GABRE-212ENST00000495862 TOPBP1Q92547 1522 aa7.94□□□□□ -1.14
GABRE-212ENST00000495862 ABCC8Q09428 1581 aa7.94□□□□□ -1.14
GABRE-212ENST00000495862 WDR62O43379 1518 aa7.93□□□□□ -1.14
GABRE-212ENST00000495862 SOGA1O94964 1423 aa7.93□□□□□ -1.14
GABRE-212ENST00000495862 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
GABRE-212ENST00000495862 WRNQ14191 1432 aaPredicted RBP eCLIP7.91□□□□□ -1.14
GABRE-212ENST00000495862 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
GABRE-212ENST00000495862 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
GABRE-212ENST00000495862 CUX1P39880 1505 aa7.89□□□□□ -1.15
GABRE-212ENST00000495862 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.152e-6■■■□□ 18.3
GABRE-212ENST00000495862 FGD5Q6ZNL6 1462 aa7.89□□□□□ -1.15
GABRE-212ENST00000495862 IFT140Q96RY7 1462 aa7.88□□□□□ -1.15
GABRE-212ENST00000495862 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
GABRE-212ENST00000495862 CHMP7Q8WUX9 453 aaPredicted RBP7.87□□□□□ -1.15
GABRE-212ENST00000495862 ZNF608Q9ULD9 1512 aaPredicted RBP7.87□□□□□ -1.15
GABRE-212ENST00000495862 FAM9AQ8IZU1 332 aaPredicted RBP7.86□□□□□ -1.15
GABRE-212ENST00000495862 EHMT2Q96KQ7 1210 aa7.85□□□□□ -1.15
GABRE-212ENST00000495862 OSCARQ8IYS5 282 aa7.84□□□□□ -1.15
GABRE-212ENST00000495862 SYNJ1O43426 1573 aa7.84□□□□□ -1.15
GABRE-212ENST00000495862 TOP2BQ02880 1626 aa7.81□□□□□ -1.16
GABRE-212ENST00000495862 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
GABRE-212ENST00000495862 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
GABRE-212ENST00000495862 TARBP1Q13395 1621 aaKnown RBP7.79□□□□□ -1.16
GABRE-212ENST00000495862 CHIC1Q5VXU3 224 aa7.79□□□□□ -1.16
GABRE-212ENST00000495862 EIF4G3O43432 1585 aaKnown RBP7.79□□□□□ -1.16
GABRE-212ENST00000495862 BIVM-ERCC5R4GMW8 1640 aa7.78□□□□□ -1.16
GABRE-212ENST00000495862 TTBK1Q5TCY1 1321 aaPredicted RBP7.78□□□□□ -1.16
GABRE-212ENST00000495862 GRIN2BQ13224 1484 aa7.77□□□□□ -1.17
GABRE-212ENST00000495862 SNAPC4Q5SXM2 1469 aa7.77□□□□□ -1.17
GABRE-212ENST00000495862 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
GABRE-212ENST00000495862 KIF27Q86VH2 1401 aa7.77□□□□□ -1.17
GABRE-212ENST00000495862 ABCA10Q8WWZ4 1543 aa7.76□□□□□ -1.17
GABRE-212ENST00000495862 PBRM1Q86U86 1689 aa7.72□□□□□ -1.17
GABRE-212ENST00000495862 RUSC2Q8N2Y8 1516 aa7.72□□□□□ -1.17
GABRE-212ENST00000495862 IGF1RP08069 1367 aa7.71□□□□□ -1.17
GABRE-212ENST00000495862 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.18
GABRE-212ENST00000495862 CSRNP3Q8WYN3 585 aa7.71□□□□□ -1.18
GABRE-212ENST00000495862 SYNJ2O15056 1496 aa7.7□□□□□ -1.18
GABRE-212ENST00000495862 MAGI1Q96QZ7 1491 aaPredicted RBP7.7□□□□□ -1.18
GABRE-212ENST00000495862 CHD1O14646 1710 aa7.7□□□□□ -1.18
GABRE-212ENST00000495862 UBTFP17480 764 aaKnown RBP7.7□□□□□ -1.18
GABRE-212ENST00000495862 CARMIL1Q5VZK9 1371 aa7.7□□□□□ -1.18
GABRE-212ENST00000495862 WDR97A6NE52 1622 aa7.69□□□□□ -1.18
GABRE-212ENST00000495862 FHAD1B1AJZ9 1412 aa7.69□□□□□ -1.18
GABRE-212ENST00000495862 ABCA5Q8WWZ7 1642 aa7.68□□□□□ -1.18
GABRE-212ENST00000495862 ERICH3Q5RHP9 1530 aa7.67□□□□□ -1.18
GABRE-212ENST00000495862 JPH4Q96JJ6 628 aa7.66□□□□□ -1.18
GABRE-212ENST00000495862 GRIN2AQ12879 1464 aa7.66□□□□□ -1.18
GABRE-212ENST00000495862 P3H3Q8IVL6 736 aa7.65□□□□□ -1.18
GABRE-212ENST00000495862 ADAMTS12P58397 1594 aa7.63□□□□□ -1.19
GABRE-212ENST00000495862 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
GABRE-212ENST00000495862 TRHP20396 242 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms