RNA–Protein interactions for RNA: ENST00000495828.1

ERI3-209, Transcript of ERI1 exoribonuclease family member 3, humanhuman

TSL 3

Gene ERI3, Length 972 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-209ENST00000495828 NISCHQ9Y2I1 1504 aa55.7■■■■■ 6.51
ERI3-209ENST00000495828 CCDC180Q9P1Z9 1646 aa49.78■■■■■ 5.56
ERI3-209ENST00000495828 ABCC9O60706 1549 aa49.54■■■■■ 5.52
ERI3-209ENST00000495828 RB1CC1Q8TDY2 1594 aa47.28■■■■■ 5.16
ERI3-209ENST00000495828 NACADO15069 1562 aa47.04■■■■■ 5.12
ERI3-209ENST00000495828 DCAF8L2P0C7V8 631 aa46.96■■■■■ 5.11
ERI3-209ENST00000495828 MYO15BQ96JP2 1530 aa46.52■■■■■ 5.04
ERI3-209ENST00000495828 DNAJC5BQ9UF47 199 aa46.22■■■■■ 4.99
ERI3-209ENST00000495828 ZCCHC6Q5VYS8 1495 aaKnown RBP46.22■■■■■ 4.99
ERI3-209ENST00000495828 PABPN1Q86U42 306 aaKnown RBP eCLIP46.21■■■■■ 4.99
ERI3-209ENST00000495828 UNC13AQ9UPW8 1703 aa46.11■■■■■ 4.97
ERI3-209ENST00000495828 DCAF1Q9Y4B6 1507 aa46.03■■■■■ 4.96
ERI3-209ENST00000495828 BICRAQ9NZM4 1560 aa45.87■■■■■ 4.93
ERI3-209ENST00000495828 SCRIBQ14160 1630 aa45.4■■■■■ 4.86
ERI3-209ENST00000495828 SHROOM4Q9ULL8 1493 aa45.32■■■■■ 4.85
ERI3-209ENST00000495828 CC2D2AQ9P2K1 1620 aa44.74■■■■■ 4.75
ERI3-209ENST00000495828 EIF4G1Q04637 1599 aaKnown RBP44.73■■■■■ 4.75
ERI3-209ENST00000495828 CECR2Q9BXF3 1484 aa44.6■■■■■ 4.73
ERI3-209ENST00000495828 NCAPD3P42695 1498 aa43.46■■■■■ 4.55
ERI3-209ENST00000495828 ATAD2BQ9ULI0 1458 aa43.36■■■■■ 4.53
ERI3-209ENST00000495828 SMARCA4P51532 1647 aa43.35■■■■■ 4.53
ERI3-209ENST00000495828 SMARCA2P51531 1590 aa43.24■■■■■ 4.51
ERI3-209ENST00000495828 BAZ1AQ9NRL2 1556 aaPredicted RBP43.2■■■■■ 4.51
ERI3-209ENST00000495828 HMGXB3Q12766 1538 aa43.12■■■■■ 4.49
ERI3-209ENST00000495828 BAZ1BQ9UIG0 1483 aaKnown RBP42.95■■■■■ 4.47
ERI3-209ENST00000495828 PEG3Q9GZU2 1588 aa42.94■■■■■ 4.46
ERI3-209ENST00000495828 MROH2BQ7Z745 1585 aa42.91■■■■■ 4.46
ERI3-209ENST00000495828 ERCC6Q03468 1493 aa42.76■■■■■ 4.44
ERI3-209ENST00000495828 NESP48681 1621 aa42.64■■■■■ 4.42
ERI3-209ENST00000495828 CUX2O14529 1486 aa42.56■■■■■ 4.4
ERI3-209ENST00000495828 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
ERI3-209ENST00000495828 WIZO95785 1651 aa42.38■■■■■ 4.37
ERI3-209ENST00000495828 DNAJC5Q9H3Z4 198 aa42.24■■■■■ 4.35
ERI3-209ENST00000495828 RSF1Q96T23 1441 aaPredicted RBP42.18■■■■■ 4.34
ERI3-209ENST00000495828 PDS5BQ9NTI5 1447 aa42.18■■■■■ 4.34
ERI3-209ENST00000495828 CADPSQ9ULU8 1353 aa42.16■■■■■ 4.34
ERI3-209ENST00000495828 THOC2Q8NI27 1593 aaKnown RBP42.09■■■■■ 4.33
ERI3-209ENST00000495828 KIF21AQ7Z4S6 1674 aa42.03■■■■■ 4.32
ERI3-209ENST00000495828 TOP2AP11388 1531 aaKnown RBP41.9■■■■■ 4.3
ERI3-209ENST00000495828 MRC2Q9UBG0 1479 aa41.77■■■■■ 4.28
ERI3-209ENST00000495828 CFTRP13569 1480 aa41.73■■■■■ 4.27
ERI3-209ENST00000495828 CEP164Q9UPV0 1460 aa41.66■■■■■ 4.26
ERI3-209ENST00000495828 FANCD2Q9BXW9 1451 aa41.66■■■■■ 4.26
ERI3-209ENST00000495828 WDR62O43379 1518 aa41.64■■■■■ 4.26
ERI3-209ENST00000495828 CCDC88BA6NC98 1476 aa41.45■■■■■ 4.23
ERI3-209ENST00000495828 URB2Q14146 1524 aaKnown RBP41.28■■■■■ 4.2
ERI3-209ENST00000495828 PRDM2Q13029 1718 aa41.22■■■■■ 4.19
ERI3-209ENST00000495828 TOPBP1Q92547 1522 aa40.89■■■■■ 4.14
ERI3-209ENST00000495828 ABCC8Q09428 1581 aa40.86■■■■■ 4.13
ERI3-209ENST00000495828 IFT140Q96RY7 1462 aa40.83■■■■■ 4.13
ERI3-209ENST00000495828 DNMBPQ6XZF7 1577 aa40.75■■■■■ 4.11
ERI3-209ENST00000495828 OSCARQ8IYS5 282 aa40.75■■■■■ 4.11
ERI3-209ENST00000495828 ZNF608Q9ULD9 1512 aaPredicted RBP40.72■■■■■ 4.11
ERI3-209ENST00000495828 SUPT5HO00267 1087 aaKnown RBP40.59■■■■■ 4.09
ERI3-209ENST00000495828 TRIM41Q8WV44 630 aa40.5■■■■■ 4.07
ERI3-209ENST00000495828 POLA1P09884 1462 aaPredicted RBP40.5■■■■■ 4.07
ERI3-209ENST00000495828 TARBP1Q13395 1621 aaKnown RBP40.48■■■■■ 4.07
ERI3-209ENST00000495828 EIF4G3O43432 1585 aaKnown RBP40.47■■■■■ 4.07
ERI3-209ENST00000495828 AQRO60306 1485 aaKnown RBP eCLIP40.42■■■■■ 4.062e-6■■■■□ 23.8
ERI3-209ENST00000495828 SOGA1O94964 1423 aa40.36■■■■■ 4.05
ERI3-209ENST00000495828 RAD54L2Q9Y4B4 1467 aa40.35■■■■■ 4.05
ERI3-209ENST00000495828 CUX1P39880 1505 aa40.3■■■■■ 4.04
ERI3-209ENST00000495828 FGD5Q6ZNL6 1462 aa40.29■■■■■ 4.04
ERI3-209ENST00000495828 TDRD9Q8NDG6 1382 aaKnown RBP40.23■■■■■ 4.03
ERI3-209ENST00000495828 FBLN2P98095 1184 aa40.13■■■■■ 4.01
ERI3-209ENST00000495828 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
ERI3-209ENST00000495828 CHD1O14646 1710 aa40.08■■■■■ 4.01
ERI3-209ENST00000495828 RIMBP3CA6NJZ7 1639 aa40.07■■■■■ 4.01
ERI3-209ENST00000495828 RIMBP3BA6NNM3 1639 aa40.07■■■■■ 4.01
ERI3-209ENST00000495828 RIMBP3Q9UFD9 1639 aa40.07■■■■■ 4.01
ERI3-209ENST00000495828 ARHGEF11O15085 1522 aa40.01■■■■□ 3.99
ERI3-209ENST00000495828 SNAPC4Q5SXM2 1469 aa39.99■■■■□ 3.99
ERI3-209ENST00000495828 GRIN2BQ13224 1484 aa39.95■■■■□ 3.99
ERI3-209ENST00000495828 MAGI1Q96QZ7 1491 aaPredicted RBP39.92■■■■□ 3.98
ERI3-209ENST00000495828 CHMP7Q8WUX9 453 aaPredicted RBP39.9■■■■□ 3.98
ERI3-209ENST00000495828 ABCA10Q8WWZ4 1543 aa39.86■■■■□ 3.97
ERI3-209ENST00000495828 GAPVD1Q14C86 1478 aa39.86■■■■□ 3.97
ERI3-209ENST00000495828 WRNQ14191 1432 aaPredicted RBP eCLIP39.8■■■■□ 3.96
ERI3-209ENST00000495828 SYNJ2O15056 1496 aa39.78■■■■□ 3.96
ERI3-209ENST00000495828 CYB5RLQ6IPT4 315 aa39.77■■■■□ 3.96
ERI3-209ENST00000495828 TOP2BQ02880 1626 aa39.73■■■■□ 3.95
ERI3-209ENST00000495828 ABCA5Q8WWZ7 1642 aa39.73■■■■□ 3.95
ERI3-209ENST00000495828 PBRM1Q86U86 1689 aa39.72■■■■□ 3.95
ERI3-209ENST00000495828 BIVM-ERCC5R4GMW8 1640 aa39.7■■■■□ 3.95
ERI3-209ENST00000495828 SYNJ1O43426 1573 aa39.69■■■■□ 3.94
ERI3-209ENST00000495828 CLASP1Q7Z460 1538 aa39.67■■■■□ 3.94
ERI3-209ENST00000495828 ARAP1Q96P48 1450 aa39.63■■■■□ 3.94
ERI3-209ENST00000495828 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
ERI3-209ENST00000495828 ADAMTS12P58397 1594 aa39.4■■■■□ 3.9
ERI3-209ENST00000495828 FHAD1B1AJZ9 1412 aa39.37■■■■□ 3.89
ERI3-209ENST00000495828 ERICH3Q5RHP9 1530 aa39.36■■■■□ 3.89
ERI3-209ENST00000495828 NUP160Q12769 1436 aa39.29■■■■□ 3.88
ERI3-209ENST00000495828 CEP170Q5SW79 1584 aa39.24■■■■□ 3.87
ERI3-209ENST00000495828 TRHP20396 242 aaPredicted RBP39.22■■■■□ 3.87
ERI3-209ENST00000495828 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
ERI3-209ENST00000495828 SHROOM2Q13796 1616 aa39.03■■■■□ 3.84
ERI3-209ENST00000495828 KIF27Q86VH2 1401 aa39.02■■■■□ 3.84
ERI3-209ENST00000495828 IGF1RP08069 1367 aa38.98■■■■□ 3.83
ERI3-209ENST00000495828 JPH4Q96JJ6 628 aa38.95■■■■□ 3.83
ERI3-209ENST00000495828 PRG4Q92954 1404 aaPredicted RBP38.9■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms