RNA–Protein interactions for RNA: ENST00000495634.5

ABCA9-207, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 1 (best) BASIC

Gene ABCA9, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-207ENST00000495634 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
ABCA9-207ENST00000495634 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
ABCA9-207ENST00000495634 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
ABCA9-207ENST00000495634 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
ABCA9-207ENST00000495634 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.79
ABCA9-207ENST00000495634 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
ABCA9-207ENST00000495634 FOXD1Q16676 465 aa18.49■□□□□ 0.55
ABCA9-207ENST00000495634 CCDC180Q9P1Z9 1646 aa18.44■□□□□ 0.54
ABCA9-207ENST00000495634 ABCC9O60706 1549 aa17.92■□□□□ 0.46
ABCA9-207ENST00000495634 ADRA2BP18089 450 aa17.78■□□□□ 0.44
ABCA9-207ENST00000495634 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
ABCA9-207ENST00000495634 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
ABCA9-207ENST00000495634 NACADO15069 1562 aa17.31■□□□□ 0.36
ABCA9-207ENST00000495634 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ABCA9-207ENST00000495634 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.35
ABCA9-207ENST00000495634 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
ABCA9-207ENST00000495634 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
ABCA9-207ENST00000495634 MSH5O43196 834 aa17.13■□□□□ 0.33
ABCA9-207ENST00000495634 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
ABCA9-207ENST00000495634 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
ABCA9-207ENST00000495634 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
ABCA9-207ENST00000495634 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
ABCA9-207ENST00000495634 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
ABCA9-207ENST00000495634 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
ABCA9-207ENST00000495634 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
ABCA9-207ENST00000495634 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
ABCA9-207ENST00000495634 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
ABCA9-207ENST00000495634 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
ABCA9-207ENST00000495634 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
ABCA9-207ENST00000495634 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
ABCA9-207ENST00000495634 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
ABCA9-207ENST00000495634 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
ABCA9-207ENST00000495634 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
ABCA9-207ENST00000495634 KCNA4P22459 653 aa16.05■□□□□ 0.16
ABCA9-207ENST00000495634 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
ABCA9-207ENST00000495634 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
ABCA9-207ENST00000495634 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
ABCA9-207ENST00000495634 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
ABCA9-207ENST00000495634 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.15
ABCA9-207ENST00000495634 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
ABCA9-207ENST00000495634 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
ABCA9-207ENST00000495634 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
ABCA9-207ENST00000495634 WIZO95785 1651 aa15.77■□□□□ 0.11
ABCA9-207ENST00000495634 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
ABCA9-207ENST00000495634 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
ABCA9-207ENST00000495634 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
ABCA9-207ENST00000495634 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
ABCA9-207ENST00000495634 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
ABCA9-207ENST00000495634 NESP48681 1621 aa15.54■□□□□ 0.08
ABCA9-207ENST00000495634 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
ABCA9-207ENST00000495634 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
ABCA9-207ENST00000495634 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
ABCA9-207ENST00000495634 CFTRP13569 1480 aa15.41■□□□□ 0.06
ABCA9-207ENST00000495634 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
ABCA9-207ENST00000495634 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
ABCA9-207ENST00000495634 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
ABCA9-207ENST00000495634 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
ABCA9-207ENST00000495634 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
ABCA9-207ENST00000495634 CUX2O14529 1486 aa15.33■□□□□ 0.04
ABCA9-207ENST00000495634 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
ABCA9-207ENST00000495634 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
ABCA9-207ENST00000495634 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
ABCA9-207ENST00000495634 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
ABCA9-207ENST00000495634 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
ABCA9-207ENST00000495634 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
ABCA9-207ENST00000495634 WDR62O43379 1518 aa15.23■□□□□ 0.03
ABCA9-207ENST00000495634 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
ABCA9-207ENST00000495634 ABCC8Q09428 1581 aa15.07■□□□□ 0
ABCA9-207ENST00000495634 TOPBP1Q92547 1522 aa15.06■□□□□ 0
ABCA9-207ENST00000495634 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
ABCA9-207ENST00000495634 CUX1P39880 1505 aa14.95□□□□□ -0.02
ABCA9-207ENST00000495634 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
ABCA9-207ENST00000495634 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
ABCA9-207ENST00000495634 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
ABCA9-207ENST00000495634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
ABCA9-207ENST00000495634 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
ABCA9-207ENST00000495634 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
ABCA9-207ENST00000495634 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
ABCA9-207ENST00000495634 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
ABCA9-207ENST00000495634 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
ABCA9-207ENST00000495634 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
ABCA9-207ENST00000495634 SOGA1O94964 1423 aa14.84□□□□□ -0.03
ABCA9-207ENST00000495634 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
ABCA9-207ENST00000495634 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.03
ABCA9-207ENST00000495634 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
ABCA9-207ENST00000495634 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
ABCA9-207ENST00000495634 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
ABCA9-207ENST00000495634 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
ABCA9-207ENST00000495634 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
ABCA9-207ENST00000495634 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
ABCA9-207ENST00000495634 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.05
ABCA9-207ENST00000495634 ZBTB22O15209 634 aa14.75□□□□□ -0.05
ABCA9-207ENST00000495634 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
ABCA9-207ENST00000495634 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
ABCA9-207ENST00000495634 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
ABCA9-207ENST00000495634 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
ABCA9-207ENST00000495634 GRIN2BQ13224 1484 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms