RNA–Protein interactions for RNA: ENST00000495097.1

PTK2B-208, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 3

Gene PTK2B, Length 270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-208ENST00000495097 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
PTK2B-208ENST00000495097 ABCC9O60706 1549 aa31.62■■■□□ 2.65
PTK2B-208ENST00000495097 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
PTK2B-208ENST00000495097 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
PTK2B-208ENST00000495097 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
PTK2B-208ENST00000495097 NACADO15069 1562 aa29.73■■■□□ 2.35
PTK2B-208ENST00000495097 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
PTK2B-208ENST00000495097 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
PTK2B-208ENST00000495097 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
PTK2B-208ENST00000495097 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
PTK2B-208ENST00000495097 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
PTK2B-208ENST00000495097 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
PTK2B-208ENST00000495097 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
PTK2B-208ENST00000495097 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
PTK2B-208ENST00000495097 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
PTK2B-208ENST00000495097 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
PTK2B-208ENST00000495097 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
PTK2B-208ENST00000495097 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
PTK2B-208ENST00000495097 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
PTK2B-208ENST00000495097 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
PTK2B-208ENST00000495097 CUX2O14529 1486 aa27.38■■□□□ 1.97
PTK2B-208ENST00000495097 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
PTK2B-208ENST00000495097 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
PTK2B-208ENST00000495097 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
PTK2B-208ENST00000495097 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
PTK2B-208ENST00000495097 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
PTK2B-208ENST00000495097 NESP48681 1621 aa27.09■■□□□ 1.93
PTK2B-208ENST00000495097 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
PTK2B-208ENST00000495097 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
PTK2B-208ENST00000495097 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
PTK2B-208ENST00000495097 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
PTK2B-208ENST00000495097 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
PTK2B-208ENST00000495097 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
PTK2B-208ENST00000495097 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
PTK2B-208ENST00000495097 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.87
PTK2B-208ENST00000495097 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
PTK2B-208ENST00000495097 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
PTK2B-208ENST00000495097 WIZO95785 1651 aa26.47■■□□□ 1.83
PTK2B-208ENST00000495097 WDR62O43379 1518 aa26.44■■□□□ 1.82
PTK2B-208ENST00000495097 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
PTK2B-208ENST00000495097 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
PTK2B-208ENST00000495097 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
PTK2B-208ENST00000495097 CFTRP13569 1480 aa26.26■■□□□ 1.79
PTK2B-208ENST00000495097 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
PTK2B-208ENST00000495097 OSCARQ8IYS5 282 aa26.14■■□□□ 1.78
PTK2B-208ENST00000495097 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
PTK2B-208ENST00000495097 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
PTK2B-208ENST00000495097 PRDM2Q13029 1718 aa25.89■■□□□ 1.74
PTK2B-208ENST00000495097 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
PTK2B-208ENST00000495097 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
PTK2B-208ENST00000495097 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
PTK2B-208ENST00000495097 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
PTK2B-208ENST00000495097 RIMBP3CA6NJZ7 1639 aa25.75■■□□□ 1.71
PTK2B-208ENST00000495097 RIMBP3BA6NNM3 1639 aa25.75■■□□□ 1.71
PTK2B-208ENST00000495097 RIMBP3Q9UFD9 1639 aa25.75■■□□□ 1.71
PTK2B-208ENST00000495097 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
PTK2B-208ENST00000495097 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
PTK2B-208ENST00000495097 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
PTK2B-208ENST00000495097 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
PTK2B-208ENST00000495097 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.688e-7■■■■■ 28.7
PTK2B-208ENST00000495097 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
PTK2B-208ENST00000495097 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
PTK2B-208ENST00000495097 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
PTK2B-208ENST00000495097 CHD1O14646 1710 aa25.47■■□□□ 1.67
PTK2B-208ENST00000495097 FBLN2P98095 1184 aa25.46■■□□□ 1.67
PTK2B-208ENST00000495097 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
PTK2B-208ENST00000495097 SOGA1O94964 1423 aa25.39■■□□□ 1.66
PTK2B-208ENST00000495097 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
PTK2B-208ENST00000495097 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
PTK2B-208ENST00000495097 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
PTK2B-208ENST00000495097 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
PTK2B-208ENST00000495097 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
PTK2B-208ENST00000495097 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
PTK2B-208ENST00000495097 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
PTK2B-208ENST00000495097 CUX1P39880 1505 aa25.22■■□□□ 1.63
PTK2B-208ENST00000495097 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
PTK2B-208ENST00000495097 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
PTK2B-208ENST00000495097 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
PTK2B-208ENST00000495097 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
PTK2B-208ENST00000495097 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
PTK2B-208ENST00000495097 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
PTK2B-208ENST00000495097 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
PTK2B-208ENST00000495097 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
PTK2B-208ENST00000495097 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
PTK2B-208ENST00000495097 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
PTK2B-208ENST00000495097 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
PTK2B-208ENST00000495097 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
PTK2B-208ENST00000495097 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
PTK2B-208ENST00000495097 NUP160Q12769 1436 aa24.79■■□□□ 1.56
PTK2B-208ENST00000495097 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
PTK2B-208ENST00000495097 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
PTK2B-208ENST00000495097 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
PTK2B-208ENST00000495097 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
PTK2B-208ENST00000495097 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
PTK2B-208ENST00000495097 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
PTK2B-208ENST00000495097 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
PTK2B-208ENST00000495097 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
PTK2B-208ENST00000495097 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
PTK2B-208ENST00000495097 PRG4Q92954 1404 aaPredicted RBP24.58■■□□□ 1.53
PTK2B-208ENST00000495097 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms