RNA–Protein interactions for RNA: ENST00000495052.5

LDHA-212, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-212ENST00000495052 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
LDHA-212ENST00000495052 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
LDHA-212ENST00000495052 ABCC9O60706 1549 aa25.38■■□□□ 1.65
LDHA-212ENST00000495052 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
LDHA-212ENST00000495052 NACADO15069 1562 aa23.99■■□□□ 1.43
LDHA-212ENST00000495052 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
LDHA-212ENST00000495052 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
LDHA-212ENST00000495052 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
LDHA-212ENST00000495052 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
LDHA-212ENST00000495052 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
LDHA-212ENST00000495052 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
LDHA-212ENST00000495052 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
LDHA-212ENST00000495052 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.34
LDHA-212ENST00000495052 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
LDHA-212ENST00000495052 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
LDHA-212ENST00000495052 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
LDHA-212ENST00000495052 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.26
LDHA-212ENST00000495052 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
LDHA-212ENST00000495052 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
LDHA-212ENST00000495052 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
LDHA-212ENST00000495052 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
LDHA-212ENST00000495052 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
LDHA-212ENST00000495052 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
LDHA-212ENST00000495052 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
LDHA-212ENST00000495052 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
LDHA-212ENST00000495052 DNAJC5Q9H3Z4 198 aa21.87■■□□□ 1.09
LDHA-212ENST00000495052 NESP48681 1621 aa21.86■■□□□ 1.09
LDHA-212ENST00000495052 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
LDHA-212ENST00000495052 CUX2O14529 1486 aa21.84■■□□□ 1.09
LDHA-212ENST00000495052 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
LDHA-212ENST00000495052 ERCC6Q03468 1493 aa21.83■■□□□ 1.08
LDHA-212ENST00000495052 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
LDHA-212ENST00000495052 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
LDHA-212ENST00000495052 WIZO95785 1651 aa21.58■■□□□ 1.05
LDHA-212ENST00000495052 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
LDHA-212ENST00000495052 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
LDHA-212ENST00000495052 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
LDHA-212ENST00000495052 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
LDHA-212ENST00000495052 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
LDHA-212ENST00000495052 WDR62O43379 1518 aa21.3■■□□□ 1
LDHA-212ENST00000495052 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
LDHA-212ENST00000495052 CFTRP13569 1480 aa21.26■□□□□ 0.99
LDHA-212ENST00000495052 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
LDHA-212ENST00000495052 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
LDHA-212ENST00000495052 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
LDHA-212ENST00000495052 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
LDHA-212ENST00000495052 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
LDHA-212ENST00000495052 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
LDHA-212ENST00000495052 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
LDHA-212ENST00000495052 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
LDHA-212ENST00000495052 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
LDHA-212ENST00000495052 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
LDHA-212ENST00000495052 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
LDHA-212ENST00000495052 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
LDHA-212ENST00000495052 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
LDHA-212ENST00000495052 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
LDHA-212ENST00000495052 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
LDHA-212ENST00000495052 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.891e-13■■■□□ 19.2
LDHA-212ENST00000495052 RIMBP3CA6NJZ7 1639 aa20.62■□□□□ 0.89
LDHA-212ENST00000495052 RIMBP3BA6NNM3 1639 aa20.62■□□□□ 0.89
LDHA-212ENST00000495052 RIMBP3Q9UFD9 1639 aa20.62■□□□□ 0.89
LDHA-212ENST00000495052 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
LDHA-212ENST00000495052 CHD1O14646 1710 aa20.56■□□□□ 0.88
LDHA-212ENST00000495052 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
LDHA-212ENST00000495052 CUX1P39880 1505 aa20.52■□□□□ 0.87
LDHA-212ENST00000495052 SOGA1O94964 1423 aa20.51■□□□□ 0.87
LDHA-212ENST00000495052 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
LDHA-212ENST00000495052 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
LDHA-212ENST00000495052 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
LDHA-212ENST00000495052 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.85
LDHA-212ENST00000495052 FBLN2P98095 1184 aa20.39■□□□□ 0.85
LDHA-212ENST00000495052 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
LDHA-212ENST00000495052 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
LDHA-212ENST00000495052 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
LDHA-212ENST00000495052 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
LDHA-212ENST00000495052 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
LDHA-212ENST00000495052 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
LDHA-212ENST00000495052 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
LDHA-212ENST00000495052 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.83
LDHA-212ENST00000495052 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
LDHA-212ENST00000495052 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
LDHA-212ENST00000495052 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
LDHA-212ENST00000495052 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
LDHA-212ENST00000495052 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
LDHA-212ENST00000495052 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
LDHA-212ENST00000495052 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
LDHA-212ENST00000495052 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
LDHA-212ENST00000495052 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
LDHA-212ENST00000495052 GRIN2AQ12879 1464 aa20.08■□□□□ 0.81
LDHA-212ENST00000495052 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
LDHA-212ENST00000495052 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
LDHA-212ENST00000495052 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
LDHA-212ENST00000495052 NUP160Q12769 1436 aa20.04■□□□□ 0.8
LDHA-212ENST00000495052 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
LDHA-212ENST00000495052 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
LDHA-212ENST00000495052 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
LDHA-212ENST00000495052 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
LDHA-212ENST00000495052 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
LDHA-212ENST00000495052 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
LDHA-212ENST00000495052 IGF1RP08069 1367 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms