RNA–Protein interactions for RNA: ENST00000494788.1

MAPRE3-209, Transcript of microtubule associated protein RP/EB family member 3, humanhuman

TSL 2

Gene MAPRE3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAPRE3-209ENST00000494788 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
MAPRE3-209ENST00000494788 ABCC9O60706 1549 aa35.35■■■■□ 3.25
MAPRE3-209ENST00000494788 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
MAPRE3-209ENST00000494788 DNAJC5BQ9UF47 199 aa33.86■■■■□ 3.01
MAPRE3-209ENST00000494788 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
MAPRE3-209ENST00000494788 NACADO15069 1562 aa33.03■■■□□ 2.88
MAPRE3-209ENST00000494788 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
MAPRE3-209ENST00000494788 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
MAPRE3-209ENST00000494788 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
MAPRE3-209ENST00000494788 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
MAPRE3-209ENST00000494788 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
MAPRE3-209ENST00000494788 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
MAPRE3-209ENST00000494788 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
MAPRE3-209ENST00000494788 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
MAPRE3-209ENST00000494788 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
MAPRE3-209ENST00000494788 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
MAPRE3-209ENST00000494788 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
MAPRE3-209ENST00000494788 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
MAPRE3-209ENST00000494788 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
MAPRE3-209ENST00000494788 CUX2O14529 1486 aa30.72■■■□□ 2.51
MAPRE3-209ENST00000494788 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
MAPRE3-209ENST00000494788 ERCC6Q03468 1493 aa30.5■■■□□ 2.47
MAPRE3-209ENST00000494788 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
MAPRE3-209ENST00000494788 NESP48681 1621 aa30.22■■■□□ 2.43
MAPRE3-209ENST00000494788 HMGXB3Q12766 1538 aa30.2■■■□□ 2.42
MAPRE3-209ENST00000494788 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
MAPRE3-209ENST00000494788 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
MAPRE3-209ENST00000494788 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
MAPRE3-209ENST00000494788 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
MAPRE3-209ENST00000494788 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
MAPRE3-209ENST00000494788 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
MAPRE3-209ENST00000494788 BAZ1AQ9NRL2 1556 aaPredicted RBP29.87■■■□□ 2.37
MAPRE3-209ENST00000494788 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.35
MAPRE3-209ENST00000494788 TRIM41Q8WV44 630 aa29.74■■■□□ 2.35
MAPRE3-209ENST00000494788 KIF21AQ7Z4S6 1674 aa29.72■■■□□ 2.35
MAPRE3-209ENST00000494788 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
MAPRE3-209ENST00000494788 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
MAPRE3-209ENST00000494788 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
MAPRE3-209ENST00000494788 WDR62O43379 1518 aa29.46■■■□□ 2.31
MAPRE3-209ENST00000494788 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
MAPRE3-209ENST00000494788 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
MAPRE3-209ENST00000494788 WIZO95785 1651 aa29.22■■■□□ 2.27
MAPRE3-209ENST00000494788 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
MAPRE3-209ENST00000494788 CFTRP13569 1480 aa29.12■■■□□ 2.25
MAPRE3-209ENST00000494788 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
MAPRE3-209ENST00000494788 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
MAPRE3-209ENST00000494788 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
MAPRE3-209ENST00000494788 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
MAPRE3-209ENST00000494788 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
MAPRE3-209ENST00000494788 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
MAPRE3-209ENST00000494788 ZNF608Q9ULD9 1512 aaPredicted RBP28.77■■■□□ 2.2
MAPRE3-209ENST00000494788 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
MAPRE3-209ENST00000494788 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
MAPRE3-209ENST00000494788 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
MAPRE3-209ENST00000494788 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
MAPRE3-209ENST00000494788 TOPBP1Q92547 1522 aa28.59■■■□□ 2.17
MAPRE3-209ENST00000494788 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
MAPRE3-209ENST00000494788 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
MAPRE3-209ENST00000494788 EIF4G3O43432 1585 aaKnown RBP28.48■■■□□ 2.15
MAPRE3-209ENST00000494788 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.143e-9■■■■□ 20.8
MAPRE3-209ENST00000494788 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
MAPRE3-209ENST00000494788 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
MAPRE3-209ENST00000494788 DNMBPQ6XZF7 1577 aa28.39■■■□□ 2.14
MAPRE3-209ENST00000494788 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.13
MAPRE3-209ENST00000494788 CHD1O14646 1710 aa28.38■■■□□ 2.13
MAPRE3-209ENST00000494788 FBLN2P98095 1184 aa28.32■■■□□ 2.12
MAPRE3-209ENST00000494788 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
MAPRE3-209ENST00000494788 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
MAPRE3-209ENST00000494788 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
MAPRE3-209ENST00000494788 SOGA1O94964 1423 aa28.15■■■□□ 2.1
MAPRE3-209ENST00000494788 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
MAPRE3-209ENST00000494788 SNAPC4Q5SXM2 1469 aa28.07■■■□□ 2.08
MAPRE3-209ENST00000494788 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
MAPRE3-209ENST00000494788 WDR97A6NE52 1622 aa28.01■■■□□ 2.07
MAPRE3-209ENST00000494788 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
MAPRE3-209ENST00000494788 MAGI1Q96QZ7 1491 aaPredicted RBP27.99■■■□□ 2.07
MAPRE3-209ENST00000494788 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
MAPRE3-209ENST00000494788 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
MAPRE3-209ENST00000494788 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
MAPRE3-209ENST00000494788 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
MAPRE3-209ENST00000494788 CUX1P39880 1505 aa27.88■■■□□ 2.05
MAPRE3-209ENST00000494788 GAPVD1Q14C86 1478 aa27.85■■■□□ 2.05
MAPRE3-209ENST00000494788 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
MAPRE3-209ENST00000494788 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
MAPRE3-209ENST00000494788 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
MAPRE3-209ENST00000494788 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
MAPRE3-209ENST00000494788 GRIN2AQ12879 1464 aa27.57■■■□□ 2
MAPRE3-209ENST00000494788 NUP160Q12769 1436 aa27.55■■■□□ 2
MAPRE3-209ENST00000494788 CEP170Q5SW79 1584 aa27.53■■■□□ 2
MAPRE3-209ENST00000494788 SHROOM2Q13796 1616 aa27.45■■□□□ 1.99
MAPRE3-209ENST00000494788 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
MAPRE3-209ENST00000494788 WRNQ14191 1432 aaPredicted RBP eCLIP27.42■■□□□ 1.98
MAPRE3-209ENST00000494788 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
MAPRE3-209ENST00000494788 KIF13AQ9H1H9 1805 aa27.39■■□□□ 1.98
MAPRE3-209ENST00000494788 JPH4Q96JJ6 628 aa27.31■■□□□ 1.96
MAPRE3-209ENST00000494788 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
MAPRE3-209ENST00000494788 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
MAPRE3-209ENST00000494788 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
MAPRE3-209ENST00000494788 FAM69CQ0P6D2 419 aa27.24■■□□□ 1.95
MAPRE3-209ENST00000494788 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms