RNA–Protein interactions for RNA: ENST00000494759.1

TRIM16-207, Transcript of tripartite motif containing 16, humanhuman

TSL 3

Gene TRIM16, Length 426 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-207ENST00000494759 NISCHQ9Y2I1 1504 aa14.84□□□□□ -0.03
TRIM16-207ENST00000494759 CCDC180Q9P1Z9 1646 aa13.16□□□□□ -0.3
TRIM16-207ENST00000494759 ABCC9O60706 1549 aa12.75□□□□□ -0.37
TRIM16-207ENST00000494759 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
TRIM16-207ENST00000494759 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
TRIM16-207ENST00000494759 NACADO15069 1562 aa12.34□□□□□ -0.43
TRIM16-207ENST00000494759 RB1CC1Q8TDY2 1594 aa12.34□□□□□ -0.43
TRIM16-207ENST00000494759 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
TRIM16-207ENST00000494759 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
TRIM16-207ENST00000494759 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
TRIM16-207ENST00000494759 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
TRIM16-207ENST00000494759 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRIM16-207ENST00000494759 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
TRIM16-207ENST00000494759 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
TRIM16-207ENST00000494759 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
TRIM16-207ENST00000494759 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
TRIM16-207ENST00000494759 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
TRIM16-207ENST00000494759 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
TRIM16-207ENST00000494759 BAZ1AQ9NRL2 1556 aaPredicted RBP11.52□□□□□ -0.57
TRIM16-207ENST00000494759 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
TRIM16-207ENST00000494759 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
TRIM16-207ENST00000494759 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
TRIM16-207ENST00000494759 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
TRIM16-207ENST00000494759 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
TRIM16-207ENST00000494759 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
TRIM16-207ENST00000494759 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
TRIM16-207ENST00000494759 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
TRIM16-207ENST00000494759 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
TRIM16-207ENST00000494759 WIZO95785 1651 aa11.33□□□□□ -0.6
TRIM16-207ENST00000494759 TOP2AP11388 1531 aaKnown RBP11.23□□□□□ -0.61
TRIM16-207ENST00000494759 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
TRIM16-207ENST00000494759 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
TRIM16-207ENST00000494759 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
TRIM16-207ENST00000494759 NESP48681 1621 aa11.06□□□□□ -0.64
TRIM16-207ENST00000494759 CADPSQ9ULU8 1353 aa11.05□□□□□ -0.64
TRIM16-207ENST00000494759 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
TRIM16-207ENST00000494759 CFTRP13569 1480 aa11□□□□□ -0.65
TRIM16-207ENST00000494759 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
TRIM16-207ENST00000494759 PRDM2Q13029 1718 aa10.96□□□□□ -0.65
TRIM16-207ENST00000494759 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
TRIM16-207ENST00000494759 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
TRIM16-207ENST00000494759 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
TRIM16-207ENST00000494759 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
TRIM16-207ENST00000494759 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
TRIM16-207ENST00000494759 CUX2O14529 1486 aa10.83□□□□□ -0.68
TRIM16-207ENST00000494759 WDR62O43379 1518 aa10.82□□□□□ -0.68
TRIM16-207ENST00000494759 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
TRIM16-207ENST00000494759 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
TRIM16-207ENST00000494759 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.68
TRIM16-207ENST00000494759 TOPBP1Q92547 1522 aa10.77□□□□□ -0.69
TRIM16-207ENST00000494759 WRNQ14191 1432 aaPredicted RBP eCLIP10.73□□□□□ -0.69
TRIM16-207ENST00000494759 CUX1P39880 1505 aa10.72□□□□□ -0.69
TRIM16-207ENST00000494759 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
TRIM16-207ENST00000494759 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
TRIM16-207ENST00000494759 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
TRIM16-207ENST00000494759 TOP2BQ02880 1626 aa10.68□□□□□ -0.7
TRIM16-207ENST00000494759 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
TRIM16-207ENST00000494759 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
TRIM16-207ENST00000494759 SOGA1O94964 1423 aa10.65□□□□□ -0.7
TRIM16-207ENST00000494759 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
TRIM16-207ENST00000494759 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
TRIM16-207ENST00000494759 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
TRIM16-207ENST00000494759 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
TRIM16-207ENST00000494759 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
TRIM16-207ENST00000494759 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
TRIM16-207ENST00000494759 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
TRIM16-207ENST00000494759 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
TRIM16-207ENST00000494759 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM16-207ENST00000494759 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
TRIM16-207ENST00000494759 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
TRIM16-207ENST00000494759 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
TRIM16-207ENST00000494759 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
TRIM16-207ENST00000494759 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
TRIM16-207ENST00000494759 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
TRIM16-207ENST00000494759 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
TRIM16-207ENST00000494759 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
TRIM16-207ENST00000494759 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
TRIM16-207ENST00000494759 FBLN2P98095 1184 aa10.46□□□□□ -0.73
TRIM16-207ENST00000494759 CHMP7Q8WUX9 453 aaPredicted RBP10.44□□□□□ -0.74
TRIM16-207ENST00000494759 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
TRIM16-207ENST00000494759 CHD1O14646 1710 aa10.43□□□□□ -0.74
TRIM16-207ENST00000494759 ADAMTS12P58397 1594 aa10.43□□□□□ -0.74
TRIM16-207ENST00000494759 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
TRIM16-207ENST00000494759 CUL7Q14999 1698 aa10.41□□□□□ -0.74
TRIM16-207ENST00000494759 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.74
TRIM16-207ENST00000494759 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
TRIM16-207ENST00000494759 IGF1RP08069 1367 aa10.39□□□□□ -0.75
TRIM16-207ENST00000494759 EEA1Q15075 1411 aa10.39□□□□□ -0.75
TRIM16-207ENST00000494759 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
TRIM16-207ENST00000494759 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
TRIM16-207ENST00000494759 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
TRIM16-207ENST00000494759 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
TRIM16-207ENST00000494759 RAPGEF2Q9Y4G8 1499 aa10.33□□□□□ -0.76
TRIM16-207ENST00000494759 DNAJC5Q9H3Z4 198 aa10.32□□□□□ -0.76
TRIM16-207ENST00000494759 CEP170Q5SW79 1584 aa10.31□□□□□ -0.76
TRIM16-207ENST00000494759 NUP160Q12769 1436 aa10.31□□□□□ -0.76
TRIM16-207ENST00000494759 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
TRIM16-207ENST00000494759 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
TRIM16-207ENST00000494759 KIF21BO75037 1637 aa10.25□□□□□ -0.77
TRIM16-207ENST00000494759 KIAA0586Q9BVV6 1533 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms