RNA–Protein interactions for RNA: ENST00000494664.5

TIMMDC1-208, Transcript of translocase of inner mitochondrial membrane domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMMDC1, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1-208ENST00000494664 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
TIMMDC1-208ENST00000494664 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
TIMMDC1-208ENST00000494664 ABCC9O60706 1549 aa23.51■■□□□ 1.35
TIMMDC1-208ENST00000494664 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
TIMMDC1-208ENST00000494664 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
TIMMDC1-208ENST00000494664 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
TIMMDC1-208ENST00000494664 NACADO15069 1562 aa22.77■■□□□ 1.24
TIMMDC1-208ENST00000494664 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
TIMMDC1-208ENST00000494664 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
TIMMDC1-208ENST00000494664 SCRIBQ14160 1630 aa22.33■■□□□ 1.17
TIMMDC1-208ENST00000494664 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
TIMMDC1-208ENST00000494664 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
TIMMDC1-208ENST00000494664 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
TIMMDC1-208ENST00000494664 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
TIMMDC1-208ENST00000494664 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
TIMMDC1-208ENST00000494664 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
TIMMDC1-208ENST00000494664 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
TIMMDC1-208ENST00000494664 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
TIMMDC1-208ENST00000494664 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
TIMMDC1-208ENST00000494664 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
TIMMDC1-208ENST00000494664 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
TIMMDC1-208ENST00000494664 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
TIMMDC1-208ENST00000494664 WIZO95785 1651 aa21.14■□□□□ 0.98
TIMMDC1-208ENST00000494664 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
TIMMDC1-208ENST00000494664 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
TIMMDC1-208ENST00000494664 SMARCA2P51531 1590 aa21.08■□□□□ 0.96
TIMMDC1-208ENST00000494664 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
TIMMDC1-208ENST00000494664 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
TIMMDC1-208ENST00000494664 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
TIMMDC1-208ENST00000494664 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
TIMMDC1-208ENST00000494664 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TIMMDC1-208ENST00000494664 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
TIMMDC1-208ENST00000494664 NESP48681 1621 aa20.49■□□□□ 0.87
TIMMDC1-208ENST00000494664 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
TIMMDC1-208ENST00000494664 CFTRP13569 1480 aa20.42■□□□□ 0.86
TIMMDC1-208ENST00000494664 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
TIMMDC1-208ENST00000494664 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
TIMMDC1-208ENST00000494664 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
TIMMDC1-208ENST00000494664 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
TIMMDC1-208ENST00000494664 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
TIMMDC1-208ENST00000494664 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
TIMMDC1-208ENST00000494664 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
TIMMDC1-208ENST00000494664 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
TIMMDC1-208ENST00000494664 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
TIMMDC1-208ENST00000494664 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
TIMMDC1-208ENST00000494664 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
TIMMDC1-208ENST00000494664 CUX1P39880 1505 aa19.99■□□□□ 0.79
TIMMDC1-208ENST00000494664 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
TIMMDC1-208ENST00000494664 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
TIMMDC1-208ENST00000494664 WDR62O43379 1518 aa19.96■□□□□ 0.79
TIMMDC1-208ENST00000494664 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
TIMMDC1-208ENST00000494664 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
TIMMDC1-208ENST00000494664 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
TIMMDC1-208ENST00000494664 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
TIMMDC1-208ENST00000494664 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
TIMMDC1-208ENST00000494664 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
TIMMDC1-208ENST00000494664 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.77
TIMMDC1-208ENST00000494664 CUX2O14529 1486 aa19.81■□□□□ 0.76
TIMMDC1-208ENST00000494664 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
TIMMDC1-208ENST00000494664 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
TIMMDC1-208ENST00000494664 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
TIMMDC1-208ENST00000494664 SOGA1O94964 1423 aa19.72■□□□□ 0.75
TIMMDC1-208ENST00000494664 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
TIMMDC1-208ENST00000494664 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
TIMMDC1-208ENST00000494664 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
TIMMDC1-208ENST00000494664 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
TIMMDC1-208ENST00000494664 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
TIMMDC1-208ENST00000494664 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.735e-6■■■■□ 23.9
TIMMDC1-208ENST00000494664 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
TIMMDC1-208ENST00000494664 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
TIMMDC1-208ENST00000494664 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
TIMMDC1-208ENST00000494664 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
TIMMDC1-208ENST00000494664 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
TIMMDC1-208ENST00000494664 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
TIMMDC1-208ENST00000494664 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
TIMMDC1-208ENST00000494664 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
TIMMDC1-208ENST00000494664 IGF1RP08069 1367 aa19.41■□□□□ 0.7
TIMMDC1-208ENST00000494664 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.7
TIMMDC1-208ENST00000494664 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
TIMMDC1-208ENST00000494664 EEA1Q15075 1411 aa19.36■□□□□ 0.69
TIMMDC1-208ENST00000494664 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
TIMMDC1-208ENST00000494664 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
TIMMDC1-208ENST00000494664 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
TIMMDC1-208ENST00000494664 CUL7Q14999 1698 aa19.3■□□□□ 0.68
TIMMDC1-208ENST00000494664 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
TIMMDC1-208ENST00000494664 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
TIMMDC1-208ENST00000494664 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
TIMMDC1-208ENST00000494664 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
TIMMDC1-208ENST00000494664 CHD1O14646 1710 aa19.24■□□□□ 0.67
TIMMDC1-208ENST00000494664 FBLN2P98095 1184 aa19.24■□□□□ 0.67
TIMMDC1-208ENST00000494664 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
TIMMDC1-208ENST00000494664 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
TIMMDC1-208ENST00000494664 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
TIMMDC1-208ENST00000494664 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
TIMMDC1-208ENST00000494664 KIF21BO75037 1637 aa19.19■□□□□ 0.66
TIMMDC1-208ENST00000494664 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
TIMMDC1-208ENST00000494664 HRCP23327 699 aa19.12■□□□□ 0.65
TIMMDC1-208ENST00000494664 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
TIMMDC1-208ENST00000494664 NUP160Q12769 1436 aa19.1■□□□□ 0.65
TIMMDC1-208ENST00000494664 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms