RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 NISCHQ9Y2I1 1504 aa35.46■■■■□ 3.27
PMP22-206ENST00000494511 CCDC180Q9P1Z9 1646 aa31.61■■■□□ 2.65
PMP22-206ENST00000494511 ABCC9O60706 1549 aa31.48■■■□□ 2.63
PMP22-206ENST00000494511 RB1CC1Q8TDY2 1594 aa29.92■■■□□ 2.38
PMP22-206ENST00000494511 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
PMP22-206ENST00000494511 NACADO15069 1562 aa29.79■■■□□ 2.36
PMP22-206ENST00000494511 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
PMP22-206ENST00000494511 ZCCHC6Q5VYS8 1495 aaKnown RBP29.46■■■□□ 2.31
PMP22-206ENST00000494511 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
PMP22-206ENST00000494511 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
PMP22-206ENST00000494511 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
PMP22-206ENST00000494511 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PMP22-206ENST00000494511 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
PMP22-206ENST00000494511 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
PMP22-206ENST00000494511 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
PMP22-206ENST00000494511 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
PMP22-206ENST00000494511 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
PMP22-206ENST00000494511 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
PMP22-206ENST00000494511 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
PMP22-206ENST00000494511 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
PMP22-206ENST00000494511 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
PMP22-206ENST00000494511 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
PMP22-206ENST00000494511 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
PMP22-206ENST00000494511 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
PMP22-206ENST00000494511 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
PMP22-206ENST00000494511 HMGXB3Q12766 1538 aa27.33■■□□□ 1.97
PMP22-206ENST00000494511 CUX2O14529 1486 aa27.28■■□□□ 1.96
PMP22-206ENST00000494511 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
PMP22-206ENST00000494511 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
PMP22-206ENST00000494511 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
PMP22-206ENST00000494511 WIZO95785 1651 aa27.07■■□□□ 1.92
PMP22-206ENST00000494511 NESP48681 1621 aa27.02■■□□□ 1.92
PMP22-206ENST00000494511 RSF1Q96T23 1441 aaPredicted RBP26.92■■□□□ 1.9
PMP22-206ENST00000494511 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
PMP22-206ENST00000494511 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
PMP22-206ENST00000494511 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
PMP22-206ENST00000494511 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
PMP22-206ENST00000494511 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
PMP22-206ENST00000494511 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
PMP22-206ENST00000494511 CFTRP13569 1480 aa26.48■■□□□ 1.83
PMP22-206ENST00000494511 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
PMP22-206ENST00000494511 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
PMP22-206ENST00000494511 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
PMP22-206ENST00000494511 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
PMP22-206ENST00000494511 WDR62O43379 1518 aa26.37■■□□□ 1.81
PMP22-206ENST00000494511 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
PMP22-206ENST00000494511 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
PMP22-206ENST00000494511 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
PMP22-206ENST00000494511 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
PMP22-206ENST00000494511 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
PMP22-206ENST00000494511 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
PMP22-206ENST00000494511 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
PMP22-206ENST00000494511 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
PMP22-206ENST00000494511 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
PMP22-206ENST00000494511 ZNF608Q9ULD9 1512 aaPredicted RBP25.82■■□□□ 1.72
PMP22-206ENST00000494511 RIMBP3CA6NJZ7 1639 aa25.73■■□□□ 1.71
PMP22-206ENST00000494511 RIMBP3BA6NNM3 1639 aa25.73■■□□□ 1.71
PMP22-206ENST00000494511 RIMBP3Q9UFD9 1639 aa25.73■■□□□ 1.71
PMP22-206ENST00000494511 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
PMP22-206ENST00000494511 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
PMP22-206ENST00000494511 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
PMP22-206ENST00000494511 CUX1P39880 1505 aa25.68■■□□□ 1.7
PMP22-206ENST00000494511 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
PMP22-206ENST00000494511 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.69
PMP22-206ENST00000494511 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.69
PMP22-206ENST00000494511 SOGA1O94964 1423 aa25.63■■□□□ 1.69
PMP22-206ENST00000494511 ARHGEF11O15085 1522 aa25.58■■□□□ 1.68
PMP22-206ENST00000494511 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
PMP22-206ENST00000494511 CHD1O14646 1710 aa25.51■■□□□ 1.67
PMP22-206ENST00000494511 FBLN2P98095 1184 aa25.44■■□□□ 1.66
PMP22-206ENST00000494511 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
PMP22-206ENST00000494511 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.66
PMP22-206ENST00000494511 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
PMP22-206ENST00000494511 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
PMP22-206ENST00000494511 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
PMP22-206ENST00000494511 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
PMP22-206ENST00000494511 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
PMP22-206ENST00000494511 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
PMP22-206ENST00000494511 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
PMP22-206ENST00000494511 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
PMP22-206ENST00000494511 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
PMP22-206ENST00000494511 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
PMP22-206ENST00000494511 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
PMP22-206ENST00000494511 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
PMP22-206ENST00000494511 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
PMP22-206ENST00000494511 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
PMP22-206ENST00000494511 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
PMP22-206ENST00000494511 TRHP20396 242 aaPredicted RBP25.11■■□□□ 1.61
PMP22-206ENST00000494511 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
PMP22-206ENST00000494511 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
PMP22-206ENST00000494511 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
PMP22-206ENST00000494511 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
PMP22-206ENST00000494511 CEP170Q5SW79 1584 aa24.93■■□□□ 1.58
PMP22-206ENST00000494511 NUP160Q12769 1436 aa24.9■■□□□ 1.58
PMP22-206ENST00000494511 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
PMP22-206ENST00000494511 IGF1RP08069 1367 aa24.83■■□□□ 1.57
PMP22-206ENST00000494511 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
PMP22-206ENST00000494511 CUL7Q14999 1698 aa24.75■■□□□ 1.55
PMP22-206ENST00000494511 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
PMP22-206ENST00000494511 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms