RNA–Protein interactions for RNA: ENST00000494332.5

PRRT1-209, Transcript of proline rich transmembrane protein 1, humanhuman

TSL 3

Gene PRRT1, Length 493 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT1-209ENST00000494332 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
PRRT1-209ENST00000494332 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
PRRT1-209ENST00000494332 ABCC9O60706 1549 aa23.52■■□□□ 1.36
PRRT1-209ENST00000494332 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
PRRT1-209ENST00000494332 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
PRRT1-209ENST00000494332 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
PRRT1-209ENST00000494332 NACADO15069 1562 aa22.92■■□□□ 1.26
PRRT1-209ENST00000494332 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
PRRT1-209ENST00000494332 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
PRRT1-209ENST00000494332 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
PRRT1-209ENST00000494332 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
PRRT1-209ENST00000494332 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
PRRT1-209ENST00000494332 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
PRRT1-209ENST00000494332 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
PRRT1-209ENST00000494332 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
PRRT1-209ENST00000494332 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
PRRT1-209ENST00000494332 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
PRRT1-209ENST00000494332 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
PRRT1-209ENST00000494332 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
PRRT1-209ENST00000494332 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
PRRT1-209ENST00000494332 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
PRRT1-209ENST00000494332 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
PRRT1-209ENST00000494332 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
PRRT1-209ENST00000494332 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
PRRT1-209ENST00000494332 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
PRRT1-209ENST00000494332 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
PRRT1-209ENST00000494332 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
PRRT1-209ENST00000494332 WIZO95785 1651 aa21.08■□□□□ 0.96
PRRT1-209ENST00000494332 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
PRRT1-209ENST00000494332 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
PRRT1-209ENST00000494332 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
PRRT1-209ENST00000494332 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
PRRT1-209ENST00000494332 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
PRRT1-209ENST00000494332 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
PRRT1-209ENST00000494332 CFTRP13569 1480 aa20.48■□□□□ 0.87
PRRT1-209ENST00000494332 NESP48681 1621 aa20.46■□□□□ 0.87
PRRT1-209ENST00000494332 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
PRRT1-209ENST00000494332 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
PRRT1-209ENST00000494332 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
PRRT1-209ENST00000494332 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
PRRT1-209ENST00000494332 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
PRRT1-209ENST00000494332 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
PRRT1-209ENST00000494332 THOC2Q8NI27 1593 aaKnown RBP20.18■□□□□ 0.82
PRRT1-209ENST00000494332 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
PRRT1-209ENST00000494332 WDR62O43379 1518 aa20.09■□□□□ 0.81
PRRT1-209ENST00000494332 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
PRRT1-209ENST00000494332 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
PRRT1-209ENST00000494332 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
PRRT1-209ENST00000494332 TOPBP1Q92547 1522 aa20■□□□□ 0.79
PRRT1-209ENST00000494332 CUX2O14529 1486 aa19.99■□□□□ 0.79
PRRT1-209ENST00000494332 CUX1P39880 1505 aa19.98■□□□□ 0.79
PRRT1-209ENST00000494332 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
PRRT1-209ENST00000494332 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
PRRT1-209ENST00000494332 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
PRRT1-209ENST00000494332 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
PRRT1-209ENST00000494332 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
PRRT1-209ENST00000494332 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
PRRT1-209ENST00000494332 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
PRRT1-209ENST00000494332 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
PRRT1-209ENST00000494332 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
PRRT1-209ENST00000494332 SOGA1O94964 1423 aa19.71■□□□□ 0.75
PRRT1-209ENST00000494332 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
PRRT1-209ENST00000494332 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
PRRT1-209ENST00000494332 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
PRRT1-209ENST00000494332 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
PRRT1-209ENST00000494332 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
PRRT1-209ENST00000494332 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
PRRT1-209ENST00000494332 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
PRRT1-209ENST00000494332 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
PRRT1-209ENST00000494332 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.723e-19■■■■■ 90.6
PRRT1-209ENST00000494332 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
PRRT1-209ENST00000494332 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
PRRT1-209ENST00000494332 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
PRRT1-209ENST00000494332 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
PRRT1-209ENST00000494332 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
PRRT1-209ENST00000494332 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
PRRT1-209ENST00000494332 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
PRRT1-209ENST00000494332 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
PRRT1-209ENST00000494332 EEA1Q15075 1411 aa19.4■□□□□ 0.7
PRRT1-209ENST00000494332 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.69
PRRT1-209ENST00000494332 CUL7Q14999 1698 aa19.38■□□□□ 0.69
PRRT1-209ENST00000494332 IGF1RP08069 1367 aa19.35■□□□□ 0.69
PRRT1-209ENST00000494332 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
PRRT1-209ENST00000494332 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
PRRT1-209ENST00000494332 CHD1O14646 1710 aa19.31■□□□□ 0.68
PRRT1-209ENST00000494332 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
PRRT1-209ENST00000494332 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
PRRT1-209ENST00000494332 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
PRRT1-209ENST00000494332 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
PRRT1-209ENST00000494332 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
PRRT1-209ENST00000494332 KIF21BO75037 1637 aa19.19■□□□□ 0.66
PRRT1-209ENST00000494332 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
PRRT1-209ENST00000494332 NUP160Q12769 1436 aa19.17■□□□□ 0.66
PRRT1-209ENST00000494332 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
PRRT1-209ENST00000494332 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
PRRT1-209ENST00000494332 FBLN2P98095 1184 aa19.14■□□□□ 0.65
PRRT1-209ENST00000494332 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
PRRT1-209ENST00000494332 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
PRRT1-209ENST00000494332 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
PRRT1-209ENST00000494332 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms