RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
SAPCD1-211ENST00000494299 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
SAPCD1-211ENST00000494299 ABCC9O60706 1549 aa28.89■■■□□ 2.22
SAPCD1-211ENST00000494299 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
SAPCD1-211ENST00000494299 NACADO15069 1562 aa27.76■■■□□ 2.03
SAPCD1-211ENST00000494299 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
SAPCD1-211ENST00000494299 ZCCHC6Q5VYS8 1495 aaKnown RBP27.48■■□□□ 1.99
SAPCD1-211ENST00000494299 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
SAPCD1-211ENST00000494299 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
SAPCD1-211ENST00000494299 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
SAPCD1-211ENST00000494299 BICRAQ9NZM4 1560 aa27.06■■□□□ 1.92
SAPCD1-211ENST00000494299 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
SAPCD1-211ENST00000494299 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
SAPCD1-211ENST00000494299 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
SAPCD1-211ENST00000494299 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
SAPCD1-211ENST00000494299 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
SAPCD1-211ENST00000494299 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
SAPCD1-211ENST00000494299 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
SAPCD1-211ENST00000494299 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
SAPCD1-211ENST00000494299 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
SAPCD1-211ENST00000494299 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
SAPCD1-211ENST00000494299 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
SAPCD1-211ENST00000494299 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
SAPCD1-211ENST00000494299 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
SAPCD1-211ENST00000494299 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
SAPCD1-211ENST00000494299 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
SAPCD1-211ENST00000494299 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
SAPCD1-211ENST00000494299 WIZO95785 1651 aa25.1■■□□□ 1.61
SAPCD1-211ENST00000494299 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
SAPCD1-211ENST00000494299 NESP48681 1621 aa24.99■■□□□ 1.59
SAPCD1-211ENST00000494299 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
SAPCD1-211ENST00000494299 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
SAPCD1-211ENST00000494299 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
SAPCD1-211ENST00000494299 CUX2O14529 1486 aa24.85■■□□□ 1.57
SAPCD1-211ENST00000494299 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
SAPCD1-211ENST00000494299 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
SAPCD1-211ENST00000494299 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
SAPCD1-211ENST00000494299 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
SAPCD1-211ENST00000494299 CFTRP13569 1480 aa24.67■■□□□ 1.54
SAPCD1-211ENST00000494299 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
SAPCD1-211ENST00000494299 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
SAPCD1-211ENST00000494299 WDR62O43379 1518 aa24.51■■□□□ 1.51
SAPCD1-211ENST00000494299 FANCD2Q9BXW9 1451 aa24.5■■□□□ 1.51
SAPCD1-211ENST00000494299 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
SAPCD1-211ENST00000494299 CEP164Q9UPV0 1460 aa24.47■■□□□ 1.51
SAPCD1-211ENST00000494299 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
SAPCD1-211ENST00000494299 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
SAPCD1-211ENST00000494299 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
SAPCD1-211ENST00000494299 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
SAPCD1-211ENST00000494299 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
SAPCD1-211ENST00000494299 IFT140Q96RY7 1462 aa24■■□□□ 1.43
SAPCD1-211ENST00000494299 SUPT5HO00267 1087 aaKnown RBP23.99■■□□□ 1.43
SAPCD1-211ENST00000494299 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
SAPCD1-211ENST00000494299 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
SAPCD1-211ENST00000494299 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
SAPCD1-211ENST00000494299 CUX1P39880 1505 aa23.86■■□□□ 1.41
SAPCD1-211ENST00000494299 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
SAPCD1-211ENST00000494299 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
SAPCD1-211ENST00000494299 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
SAPCD1-211ENST00000494299 SOGA1O94964 1423 aa23.74■■□□□ 1.39
SAPCD1-211ENST00000494299 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
SAPCD1-211ENST00000494299 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
SAPCD1-211ENST00000494299 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
SAPCD1-211ENST00000494299 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
SAPCD1-211ENST00000494299 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
SAPCD1-211ENST00000494299 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
SAPCD1-211ENST00000494299 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
SAPCD1-211ENST00000494299 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
SAPCD1-211ENST00000494299 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
SAPCD1-211ENST00000494299 CHD1O14646 1710 aa23.55■■□□□ 1.36
SAPCD1-211ENST00000494299 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
SAPCD1-211ENST00000494299 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
SAPCD1-211ENST00000494299 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
SAPCD1-211ENST00000494299 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
SAPCD1-211ENST00000494299 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
SAPCD1-211ENST00000494299 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
SAPCD1-211ENST00000494299 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
SAPCD1-211ENST00000494299 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
SAPCD1-211ENST00000494299 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
SAPCD1-211ENST00000494299 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
SAPCD1-211ENST00000494299 ARHGEF11O15085 1522 aa23.36■■□□□ 1.33
SAPCD1-211ENST00000494299 CLASP1Q7Z460 1538 aa23.36■■□□□ 1.33
SAPCD1-211ENST00000494299 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
SAPCD1-211ENST00000494299 FBLN2P98095 1184 aa23.29■■□□□ 1.32
SAPCD1-211ENST00000494299 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
SAPCD1-211ENST00000494299 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
SAPCD1-211ENST00000494299 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
SAPCD1-211ENST00000494299 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
SAPCD1-211ENST00000494299 NUP160Q12769 1436 aa23.19■■□□□ 1.3
SAPCD1-211ENST00000494299 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
SAPCD1-211ENST00000494299 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
SAPCD1-211ENST00000494299 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
SAPCD1-211ENST00000494299 IGF1RP08069 1367 aa23.08■■□□□ 1.29
SAPCD1-211ENST00000494299 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
SAPCD1-211ENST00000494299 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
SAPCD1-211ENST00000494299 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
SAPCD1-211ENST00000494299 CUL7Q14999 1698 aa23.02■■□□□ 1.28
SAPCD1-211ENST00000494299 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
SAPCD1-211ENST00000494299 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
SAPCD1-211ENST00000494299 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms