RNA–Protein interactions for RNA: ENST00000494260.2

ARID1B-209, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-209ENST00000494260 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
ARID1B-209ENST00000494260 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
ARID1B-209ENST00000494260 ABCC9O60706 1549 aa24.88■■□□□ 1.57
ARID1B-209ENST00000494260 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
ARID1B-209ENST00000494260 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
ARID1B-209ENST00000494260 NACADO15069 1562 aa23.6■■□□□ 1.37
ARID1B-209ENST00000494260 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
ARID1B-209ENST00000494260 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
ARID1B-209ENST00000494260 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
ARID1B-209ENST00000494260 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
ARID1B-209ENST00000494260 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
ARID1B-209ENST00000494260 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
ARID1B-209ENST00000494260 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
ARID1B-209ENST00000494260 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
ARID1B-209ENST00000494260 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
ARID1B-209ENST00000494260 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
ARID1B-209ENST00000494260 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
ARID1B-209ENST00000494260 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
ARID1B-209ENST00000494260 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
ARID1B-209ENST00000494260 NCAPD3P42695 1498 aa21.76■■□□□ 1.07
ARID1B-209ENST00000494260 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
ARID1B-209ENST00000494260 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
ARID1B-209ENST00000494260 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
ARID1B-209ENST00000494260 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
ARID1B-209ENST00000494260 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
ARID1B-209ENST00000494260 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
ARID1B-209ENST00000494260 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
ARID1B-209ENST00000494260 PEG3Q9GZU2 1588 aa21.5■■□□□ 1.03
ARID1B-209ENST00000494260 NESP48681 1621 aa21.4■■□□□ 1.02
ARID1B-209ENST00000494260 CUX2O14529 1486 aa21.33■■□□□ 1.01
ARID1B-209ENST00000494260 WIZO95785 1651 aa21.31■■□□□ 1
ARID1B-209ENST00000494260 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
ARID1B-209ENST00000494260 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
ARID1B-209ENST00000494260 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
ARID1B-209ENST00000494260 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
ARID1B-209ENST00000494260 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
ARID1B-209ENST00000494260 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
ARID1B-209ENST00000494260 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
ARID1B-209ENST00000494260 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
ARID1B-209ENST00000494260 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
ARID1B-209ENST00000494260 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
ARID1B-209ENST00000494260 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
ARID1B-209ENST00000494260 CFTRP13569 1480 aa20.92■□□□□ 0.94
ARID1B-209ENST00000494260 WDR62O43379 1518 aa20.88■□□□□ 0.93
ARID1B-209ENST00000494260 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
ARID1B-209ENST00000494260 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
ARID1B-209ENST00000494260 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
ARID1B-209ENST00000494260 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
ARID1B-209ENST00000494260 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
ARID1B-209ENST00000494260 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
ARID1B-209ENST00000494260 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
ARID1B-209ENST00000494260 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
ARID1B-209ENST00000494260 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
ARID1B-209ENST00000494260 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
ARID1B-209ENST00000494260 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
ARID1B-209ENST00000494260 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
ARID1B-209ENST00000494260 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
ARID1B-209ENST00000494260 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
ARID1B-209ENST00000494260 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
ARID1B-209ENST00000494260 SOGA1O94964 1423 aa20.28■□□□□ 0.84
ARID1B-209ENST00000494260 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
ARID1B-209ENST00000494260 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
ARID1B-209ENST00000494260 FBLN2P98095 1184 aa20.24■□□□□ 0.83
ARID1B-209ENST00000494260 CUX1P39880 1505 aa20.23■□□□□ 0.83
ARID1B-209ENST00000494260 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
ARID1B-209ENST00000494260 CHD1O14646 1710 aa20.15■□□□□ 0.82
ARID1B-209ENST00000494260 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
ARID1B-209ENST00000494260 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
ARID1B-209ENST00000494260 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
ARID1B-209ENST00000494260 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
ARID1B-209ENST00000494260 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
ARID1B-209ENST00000494260 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
ARID1B-209ENST00000494260 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
ARID1B-209ENST00000494260 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
ARID1B-209ENST00000494260 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
ARID1B-209ENST00000494260 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
ARID1B-209ENST00000494260 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
ARID1B-209ENST00000494260 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
ARID1B-209ENST00000494260 PBRM1Q86U86 1689 aa20■□□□□ 0.79
ARID1B-209ENST00000494260 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
ARID1B-209ENST00000494260 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
ARID1B-209ENST00000494260 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
ARID1B-209ENST00000494260 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
ARID1B-209ENST00000494260 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
ARID1B-209ENST00000494260 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
ARID1B-209ENST00000494260 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
ARID1B-209ENST00000494260 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
ARID1B-209ENST00000494260 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
ARID1B-209ENST00000494260 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
ARID1B-209ENST00000494260 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
ARID1B-209ENST00000494260 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
ARID1B-209ENST00000494260 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
ARID1B-209ENST00000494260 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
ARID1B-209ENST00000494260 NUP160Q12769 1436 aa19.68■□□□□ 0.74
ARID1B-209ENST00000494260 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
ARID1B-209ENST00000494260 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
ARID1B-209ENST00000494260 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
ARID1B-209ENST00000494260 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
ARID1B-209ENST00000494260 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
ARID1B-209ENST00000494260 IGF1RP08069 1367 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms