RNA–Protein interactions for RNA: ENST00000494124.2

DENND4C-206, Transcript of DENN domain containing 4C, humanhuman

TSL 1 (best)

Gene DENND4C, Length 5,335 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4C-206ENST00000494124 DCAF8L2P0C7V8 631 aa6.68□□□□□ -1.34
DENND4C-206ENST00000494124 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
DENND4C-206ENST00000494124 PELP1Q8IZL8 1130 aaKnown RBP6.23□□□□□ -1.41
DENND4C-206ENST00000494124 APLP2Q06481 763 aa6.19□□□□□ -1.42
DENND4C-206ENST00000494124 SUPT5HO00267 1087 aaKnown RBP6.05□□□□□ -1.44
DENND4C-206ENST00000494124 CCER1Q8TC90 406 aaPredicted RBP5.96□□□□□ -1.46
DENND4C-206ENST00000494124 NISCHQ9Y2I1 1504 aa5.93□□□□□ -1.46
DENND4C-206ENST00000494124 MYT1LQ9UL68 1186 aa5.86□□□□□ -1.47
DENND4C-206ENST00000494124 ATP1B4Q9UN42 357 aaPredicted RBP5.85□□□□□ -1.47
DENND4C-206ENST00000494124 ERICH6Q7L0X2 663 aa5.83□□□□□ -1.48
DENND4C-206ENST00000494124 EHMT2Q96KQ7 1210 aa5.82□□□□□ -1.48
DENND4C-206ENST00000494124 SHROOM4Q9ULL8 1493 aa5.78□□□□□ -1.48
DENND4C-206ENST00000494124 NEFLP07196 543 aa5.76□□□□□ -1.49
DENND4C-206ENST00000494124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.74□□□□□ -1.49
DENND4C-206ENST00000494124 HNRNPUL2Q1KMD3 747 aaKnown RBP5.74□□□□□ -1.49
DENND4C-206ENST00000494124 UBTFP17480 764 aaKnown RBP5.73□□□□□ -1.49
DENND4C-206ENST00000494124 CENPBP07199 599 aaPredicted RBP5.73□□□□□ -1.49
DENND4C-206ENST00000494124 ZEB1P37275 1124 aaPredicted RBP5.71□□□□□ -1.5
DENND4C-206ENST00000494124 RANGAP1P46060 587 aaPredicted RBP5.71□□□□□ -1.5
DENND4C-206ENST00000494124 TRIM41Q8WV44 630 aa5.7□□□□□ -1.5
DENND4C-206ENST00000494124 AEBP2Q6ZN18 517 aaPredicted RBP5.69□□□□□ -1.5
DENND4C-206ENST00000494124 DAXXQ9UER7 740 aaPredicted RBP5.69□□□□□ -1.5
DENND4C-206ENST00000494124 YTHDC1Q96MU7 727 aaKnown RBP5.65□□□□□ -1.51
DENND4C-206ENST00000494124 PCGF6Q9BYE7 350 aa5.64□□□□□ -1.51
DENND4C-206ENST00000494124 TTBK1Q5TCY1 1321 aaPredicted RBP5.63□□□□□ -1.51
DENND4C-206ENST00000494124 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
DENND4C-206ENST00000494124 ZBTB47Q9UFB7 747 aaPredicted RBP5.59□□□□□ -1.51
DENND4C-206ENST00000494124 ESF1Q9H501 851 aaKnown RBP5.59□□□□□ -1.51
DENND4C-206ENST00000494124 NEFMP07197 916 aa5.58□□□□□ -1.52
DENND4C-206ENST00000494124 POLR3GLQ9BT43 218 aa5.57□□□□□ -1.52
DENND4C-206ENST00000494124 CHIC1Q5VXU3 224 aa5.56□□□□□ -1.52
DENND4C-206ENST00000494124 CLSPNQ9HAW4 1339 aa5.53□□□□□ -1.52
DENND4C-206ENST00000494124 NPM1P06748 294 aaKnown RBP eCLIP5.53□□□□□ -1.52
DENND4C-206ENST00000494124 BCANQ96GW7 911 aa5.52□□□□□ -1.53
DENND4C-206ENST00000494124 ITGAEP38570 1179 aa5.47□□□□□ -1.53
DENND4C-206ENST00000494124 ZNF316A6NFI3 1004 aaPredicted RBP5.47□□□□□ -1.53
DENND4C-206ENST00000494124 MYT1Q01538 1121 aa5.47□□□□□ -1.53
DENND4C-206ENST00000494124 NPM2Q86SE8 214 aaKnown RBP5.46□□□□□ -1.54
DENND4C-206ENST00000494124 SLC24A1O60721 1099 aa5.46□□□□□ -1.54
DENND4C-206ENST00000494124 CDK11AQ9UQ88 783 aaPredicted RBP5.46□□□□□ -1.54
DENND4C-206ENST00000494124 FBLN2P98095 1184 aa5.46□□□□□ -1.54
DENND4C-206ENST00000494124 STAG3Q9UJ98 1225 aa5.44□□□□□ -1.54
DENND4C-206ENST00000494124 TRIM52Q96A61 297 aa5.43□□□□□ -1.54
DENND4C-206ENST00000494124 RTL5Q5HYW3 569 aaPredicted RBP5.41□□□□□ -1.54
DENND4C-206ENST00000494124 CNGB1Q14028 1251 aaPredicted RBP5.38□□□□□ -1.55
DENND4C-206ENST00000494124 FAM50AQ14320 339 aaKnown RBP5.38□□□□□ -1.55
DENND4C-206ENST00000494124 CDK11BP21127 795 aaKnown RBP5.37□□□□□ -1.55
DENND4C-206ENST00000494124 CANXP27824 592 aaKnown RBP5.37□□□□□ -1.55
DENND4C-206ENST00000494124 TRIM26Q12899 539 aaPredicted RBP5.33□□□□□ -1.56
DENND4C-206ENST00000494124 ZNF326Q5BKZ1 582 aaKnown RBP5.32□□□□□ -1.56
DENND4C-206ENST00000494124 CHGAP10645 457 aaKnown RBP5.31□□□□□ -1.56
DENND4C-206ENST00000494124 HAP1P54257 671 aaPredicted RBP5.31□□□□□ -1.56
DENND4C-206ENST00000494124 A0A0G2JS52 829 aa5.3□□□□□ -1.56
DENND4C-206ENST00000494124 ANP32BQ92688 251 aaKnown RBP5.3□□□□□ -1.56
DENND4C-206ENST00000494124 C14orf37Q86TY3 774 aa5.29□□□□□ -1.56
DENND4C-206ENST00000494124 ANP32CO43423 234 aa5.29□□□□□ -1.56
DENND4C-206ENST00000494124 PABPN1Q86U42 306 aaKnown RBP eCLIP5.29□□□□□ -1.56
DENND4C-206ENST00000494124 SCAF1Q9H7N4 1312 aaKnown RBP5.29□□□□□ -1.56
DENND4C-206ENST00000494124 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
DENND4C-206ENST00000494124 PLPPR3Q6T4P5 718 aa5.28□□□□□ -1.56
DENND4C-206ENST00000494124 UPF2Q9HAU5 1272 aaKnown RBP5.27□□□□□ -1.57
DENND4C-206ENST00000494124 TSPY4P0CV99 314 aa5.27□□□□□ -1.57
DENND4C-206ENST00000494124 TSPY10P0CW01 314 aa5.27□□□□□ -1.57
DENND4C-206ENST00000494124 ZNF777Q9ULD5 760 aaPredicted RBP5.27□□□□□ -1.57
DENND4C-206ENST00000494124 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
DENND4C-206ENST00000494124 HSP90AA1P07900 732 aaKnown RBP5.26□□□□□ -1.57
DENND4C-206ENST00000494124 PPARGC1BQ86YN6 1023 aaKnown RBP5.25□□□□□ -1.57
DENND4C-206ENST00000494124 EIF4G2P78344 907 aaKnown RBP eCLIP5.25□□□□□ -1.57
DENND4C-206ENST00000494124 ABCC9O60706 1549 aa5.24□□□□□ -1.57
DENND4C-206ENST00000494124 BCL11AQ9H165 835 aa5.24□□□□□ -1.57
DENND4C-206ENST00000494124 EIF5BO60841 1220 aaKnown RBP5.24□□□□□ -1.57
DENND4C-206ENST00000494124 NEUROD1Q13562 356 aa5.23□□□□□ -1.57
DENND4C-206ENST00000494124 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.23□□□□□ -1.57
DENND4C-206ENST00000494124 CHMP7Q8WUX9 453 aaPredicted RBP5.22□□□□□ -1.57
DENND4C-206ENST00000494124 MYH16Q9H6N6 1097 aa5.22□□□□□ -1.57
DENND4C-206ENST00000494124 NPHP1O15259 732 aa5.22□□□□□ -1.57
DENND4C-206ENST00000494124 ARID4BQ4LE39 1312 aaPredicted RBP5.22□□□□□ -1.57
DENND4C-206ENST00000494124 HDGFP51858 240 aaKnown RBP5.21□□□□□ -1.57
DENND4C-206ENST00000494124 CCDC180Q9P1Z9 1646 aa5.18□□□□□ -1.58
DENND4C-206ENST00000494124 HRCP23327 699 aa5.18□□□□□ -1.58
DENND4C-206ENST00000494124 ANP32AP39687 249 aaKnown RBP5.17□□□□□ -1.58
DENND4C-206ENST00000494124 CDCA8Q53HL2 280 aa5.17□□□□□ -1.58
DENND4C-206ENST00000494124 TRHP20396 242 aaPredicted RBP5.17□□□□□ -1.58
DENND4C-206ENST00000494124 GOLGA2Q08379 1002 aa5.17□□□□□ -1.58
DENND4C-206ENST00000494124 DCAF8L1A6NGE4 600 aa5.17□□□□□ -1.58
DENND4C-206ENST00000494124 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
DENND4C-206ENST00000494124 WDR43Q15061 677 aaKnown RBP eCLIP5.16□□□□□ -1.58
DENND4C-206ENST00000494124 ZRSR1Q15695 479 aaKnown RBP5.16□□□□□ -1.58
DENND4C-206ENST00000494124 ARID3CA6NKF2 412 aa5.16□□□□□ -1.58
DENND4C-206ENST00000494124 CFAP53Q96M91 514 aa5.16□□□□□ -1.58
DENND4C-206ENST00000494124 CHMP4AQ9BY43 222 aa5.16□□□□□ -1.58
DENND4C-206ENST00000494124 PLEKHD1A6NEE1 506 aa5.16□□□□□ -1.58
DENND4C-206ENST00000494124 CSRNP3Q8WYN3 585 aa5.16□□□□□ -1.58
DENND4C-206ENST00000494124 P3H3Q8IVL6 736 aa5.15□□□□□ -1.58
DENND4C-206ENST00000494124 ARXQ96QS3 562 aa5.15□□□□□ -1.58
DENND4C-206ENST00000494124 TONSLQ96HA7 1378 aa5.15□□□□□ -1.58
DENND4C-206ENST00000494124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.15□□□□□ -1.59
DENND4C-206ENST00000494124 CHMP4BQ9H444 224 aaKnown RBP5.15□□□□□ -1.59
DENND4C-206ENST00000494124 ZBTB7CA1YPR0 619 aa5.15□□□□□ -1.59
DENND4C-206ENST00000494124 NCLP19338 710 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms