RNA–Protein interactions for RNA: ENST00000493921.1

COBLL1-222, Transcript of cordon-bleu WH2 repeat protein like 1, human

TSL 3

Gene COBLL1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COBLL1-222	ENST00000493921	AEBP2	Q6ZN18	517 aa	Predicted RBP	17.78	■□□□□ 0.44
COBLL1-222	ENST00000493921	NISCH	Q9Y2I1	1504 aa		17.62	■□□□□ 0.41
COBLL1-222	ENST00000493921	CHIC1	Q5VXU3	224 aa		16.67	■□□□□ 0.26
COBLL1-222	ENST00000493921	CCDC180	Q9P1Z9	1646 aa		15.43	■□□□□ 0.06
COBLL1-222	ENST00000493921	SENP3	Q9H4L4	574 aa	Predicted RBP	15.29	■□□□□ 0.04
COBLL1-222	ENST00000493921	PHF23	Q9BUL5	403 aa	Predicted RBP	15.01	□□□□□ -0.01
COBLL1-222	ENST00000493921	ABCC9	O60706	1549 aa		14.98	□□□□□ -0.01
COBLL1-222	ENST00000493921	DCAF8L2	P0C7V8	631 aa		14.71	□□□□□ -0.05
COBLL1-222	ENST00000493921	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.7	□□□□□ -0.06
COBLL1-222	ENST00000493921	DCAF1	Q9Y4B6	1507 aa		14.52	□□□□□ -0.08
COBLL1-222	ENST00000493921	NACAD	O15069	1562 aa		14.48	□□□□□ -0.09
COBLL1-222	ENST00000493921	MYO15B	Q96JP2	1530 aa		14.46	□□□□□ -0.09
COBLL1-222	ENST00000493921	RB1CC1	Q8TDY2	1594 aa		14.42	□□□□□ -0.1
COBLL1-222	ENST00000493921	FOXD1	Q16676	465 aa		14.27	□□□□□ -0.13
COBLL1-222	ENST00000493921	SCRIB	Q14160	1630 aa		14.19	□□□□□ -0.14
COBLL1-222	ENST00000493921	SHROOM4	Q9ULL8	1493 aa		14.18	□□□□□ -0.14
COBLL1-222	ENST00000493921	UNC13A	Q9UPW8	1703 aa		14.15	□□□□□ -0.14
COBLL1-222	ENST00000493921	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.12	□□□□□ -0.15
COBLL1-222	ENST00000493921	BICRA	Q9NZM4	1560 aa		14.07	□□□□□ -0.16
COBLL1-222	ENST00000493921	POTED	Q86YR6	584 aa		13.99	□□□□□ -0.17
COBLL1-222	ENST00000493921	CECR2	Q9BXF3	1484 aa		13.77	□□□□□ -0.21
COBLL1-222	ENST00000493921	DNAJC5B	Q9UF47	199 aa		13.64	□□□□□ -0.23
COBLL1-222	ENST00000493921	EIF4G1	Q04637	1599 aa	Known RBP	13.62	□□□□□ -0.23
COBLL1-222	ENST00000493921	MROH2B	Q7Z745	1585 aa		13.62	□□□□□ -0.23
COBLL1-222	ENST00000493921	RSF1	Q96T23	1441 aa	Predicted RBP	13.58	□□□□□ -0.24
COBLL1-222	ENST00000493921	MSH5	O43196	834 aa		13.58	□□□□□ -0.24
COBLL1-222	ENST00000493921	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.58	□□□□□ -0.24
COBLL1-222	ENST00000493921	SMARCA4	P51532	1647 aa		13.57	□□□□□ -0.24
COBLL1-222	ENST00000493921	CC2D2A	Q9P2K1	1620 aa		13.52	□□□□□ -0.25
COBLL1-222	ENST00000493921	SUPT5H	O00267	1087 aa	Known RBP	13.49	□□□□□ -0.25
COBLL1-222	ENST00000493921	ATAD2B	Q9ULI0	1458 aa		13.48	□□□□□ -0.25
COBLL1-222	ENST00000493921	WIZ	O95785	1651 aa		13.47	□□□□□ -0.25
COBLL1-222	ENST00000493921	PEG3	Q9GZU2	1588 aa		13.42	□□□□□ -0.26
COBLL1-222	ENST00000493921	NCAPD3	P42695	1498 aa		13.42	□□□□□ -0.26
COBLL1-222	ENST00000493921	SMARCA2	P51531	1590 aa		13.4	□□□□□ -0.26
COBLL1-222	ENST00000493921	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.34	□□□□□ -0.27
COBLL1-222	ENST00000493921	HMGXB3	Q12766	1538 aa		13.31	□□□□□ -0.28
COBLL1-222	ENST00000493921	TOP2A	P11388	1531 aa	Known RBP	13.29	□□□□□ -0.28
COBLL1-222	ENST00000493921	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.25	□□□□□ -0.29
COBLL1-222	ENST00000493921	CCDC88B	A6NC98	1476 aa		13.21	□□□□□ -0.3
COBLL1-222	ENST00000493921	NES	P48681	1621 aa		13.07	□□□□□ -0.32
COBLL1-222	ENST00000493921	CADPS	Q9ULU8	1353 aa		13.06	□□□□□ -0.32
COBLL1-222	ENST00000493921	CFTR	P13569	1480 aa		13.02	□□□□□ -0.33
COBLL1-222	ENST00000493921	PLPPR3	Q6T4P5	718 aa		12.98	□□□□□ -0.33
COBLL1-222	ENST00000493921	PPP6R1	Q9UPN7	881 aa		12.98	□□□□□ -0.33
COBLL1-222	ENST00000493921	LAMC3	Q9Y6N6	1575 aa		12.94	□□□□□ -0.34
COBLL1-222	ENST00000493921	ADRA2B	P18089	450 aa		12.92	□□□□□ -0.34
COBLL1-222	ENST00000493921	FANCD2	Q9BXW9	1451 aa		12.89	□□□□□ -0.35
COBLL1-222	ENST00000493921	PDS5B	Q9NTI5	1447 aa		12.88	□□□□□ -0.35
COBLL1-222	ENST00000493921	KIF21A	Q7Z4S6	1674 aa		12.84	□□□□□ -0.35
COBLL1-222	ENST00000493921	PRDM2	Q13029	1718 aa		12.84	□□□□□ -0.35
COBLL1-222	ENST00000493921	ERCC6	Q03468	1493 aa		12.81	□□□□□ -0.36
COBLL1-222	ENST00000493921	CEP164	Q9UPV0	1460 aa		12.8	□□□□□ -0.36
COBLL1-222	ENST00000493921	ABCC8	Q09428	1581 aa		12.8	□□□□□ -0.36
COBLL1-222	ENST00000493921	URB2	Q14146	1524 aa	Known RBP	12.78	□□□□□ -0.36
COBLL1-222	ENST00000493921	CUX1	P39880	1505 aa		12.75	□□□□□ -0.37
COBLL1-222	ENST00000493921	MRC2	Q9UBG0	1479 aa		12.74	□□□□□ -0.37
COBLL1-222	ENST00000493921	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.74	□□□□□ -0.37
COBLL1-222	ENST00000493921	THOC2	Q8NI27	1593 aa	Known RBP	12.72	□□□□□ -0.37
COBLL1-222	ENST00000493921	TOPBP1	Q92547	1522 aa		12.72	□□□□□ -0.37
COBLL1-222	ENST00000493921	SYNJ1	O43426	1573 aa		12.71	□□□□□ -0.37
COBLL1-222	ENST00000493921	TRIM41	Q8WV44	630 aa		12.68	□□□□□ -0.38
COBLL1-222	ENST00000493921	DNMBP	Q6XZF7	1577 aa		12.68	□□□□□ -0.38
COBLL1-222	ENST00000493921	WDR62	O43379	1518 aa		12.67	□□□□□ -0.38
COBLL1-222	ENST00000493921	TOP2B	Q02880	1626 aa		12.66	□□□□□ -0.38
COBLL1-222	ENST00000493921	CUX2	O14529	1486 aa		12.64	□□□□□ -0.39
COBLL1-222	ENST00000493921	FGD5	Q6ZNL6	1462 aa		12.64	□□□□□ -0.39
COBLL1-222	ENST00000493921	BIVM-ERCC5	R4GMW8	1640 aa		12.63	□□□□□ -0.39
COBLL1-222	ENST00000493921	POLA1	P09884	1462 aa	Predicted RBP	12.63	□□□□□ -0.39
COBLL1-222	ENST00000493921	RAD54L2	Q9Y4B4	1467 aa		12.63	□□□□□ -0.39
COBLL1-222	ENST00000493921	SOGA1	O94964	1423 aa		12.6	□□□□□ -0.39
COBLL1-222	ENST00000493921	TARBP1	Q13395	1621 aa	Known RBP	12.55	□□□□□ -0.4
COBLL1-222	ENST00000493921	TDRD9	Q8NDG6	1382 aa	Known RBP	12.55	□□□□□ -0.4
COBLL1-222	ENST00000493921	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.54	□□□□□ -0.4
COBLL1-222	ENST00000493921	RUSC2	Q8N2Y8	1516 aa		12.53	□□□□□ -0.4
COBLL1-222	ENST00000493921	IFT140	Q96RY7	1462 aa		12.53	□□□□□ -0.4
COBLL1-222	ENST00000493921	AQR	O60306	1485 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
COBLL1-222	ENST00000493921	ABCA10	Q8WWZ4	1543 aa		12.51	□□□□□ -0.41
COBLL1-222	ENST00000493921	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.48	□□□□□ -0.41
COBLL1-222	ENST00000493921	WDR97	A6NE52	1622 aa		12.47	□□□□□ -0.41
COBLL1-222	ENST00000493921	IGF1R	P08069	1367 aa		12.44	□□□□□ -0.42
COBLL1-222	ENST00000493921	KIF27	Q86VH2	1401 aa		12.44	□□□□□ -0.42
COBLL1-222	ENST00000493921	GAPVD1	Q14C86	1478 aa		12.43	□□□□□ -0.42
COBLL1-222	ENST00000493921	ABCA5	Q8WWZ7	1642 aa		12.41	□□□□□ -0.42
COBLL1-222	ENST00000493921	EIF4G3	O43432	1585 aa	Known RBP	12.4	□□□□□ -0.42
COBLL1-222	ENST00000493921	CSRNP3	Q8WYN3	585 aa		12.4	□□□□□ -0.42
COBLL1-222	ENST00000493921	GRIN2B	Q13224	1484 aa		12.38	□□□□□ -0.43
COBLL1-222	ENST00000493921	EEA1	Q15075	1411 aa		12.34	□□□□□ -0.43
COBLL1-222	ENST00000493921	SNAPC4	Q5SXM2	1469 aa		12.34	□□□□□ -0.43
COBLL1-222	ENST00000493921	CARMIL1	Q5VZK9	1371 aa		12.33	□□□□□ -0.44
COBLL1-222	ENST00000493921	ERICH3	Q5RHP9	1530 aa		12.33	□□□□□ -0.44
COBLL1-222	ENST00000493921	PBRM1	Q86U86	1689 aa		12.33	□□□□□ -0.44
COBLL1-222	ENST00000493921	EHMT2	Q96KQ7	1210 aa		12.33	□□□□□ -0.44
COBLL1-222	ENST00000493921	LOC105371045	A0A1W2PR82	267 aa		12.31	□□□□□ -0.44
COBLL1-222	ENST00000493921	PRX	Q9BXM0	1461 aa		12.31	□□□□□ -0.44
COBLL1-222	ENST00000493921	FBLN2	P98095	1184 aa		12.3	□□□□□ -0.44
COBLL1-222	ENST00000493921	FHAD1	B1AJZ9	1412 aa		12.28	□□□□□ -0.44
COBLL1-222	ENST00000493921	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.28	□□□□□ -0.44
COBLL1-222	ENST00000493921	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.28	□□□□□ -0.44
COBLL1-222	ENST00000493921	RAPGEF2	Q9Y4G8	1499 aa		12.27	□□□□□ -0.45

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