RNA–Protein interactions for RNA: ENST00000493724.1

CDC45-212, Transcript of cell division cycle 45, humanhuman

TSL 2

Gene CDC45, Length 469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-212ENST00000493724 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
CDC45-212ENST00000493724 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
CDC45-212ENST00000493724 ABCC9O60706 1549 aa28.36■■■□□ 2.13
CDC45-212ENST00000493724 RB1CC1Q8TDY2 1594 aa27.28■■□□□ 1.96
CDC45-212ENST00000493724 NACADO15069 1562 aa27.18■■□□□ 1.94
CDC45-212ENST00000493724 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
CDC45-212ENST00000493724 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
CDC45-212ENST00000493724 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
CDC45-212ENST00000493724 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
CDC45-212ENST00000493724 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
CDC45-212ENST00000493724 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
CDC45-212ENST00000493724 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
CDC45-212ENST00000493724 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
CDC45-212ENST00000493724 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
CDC45-212ENST00000493724 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
CDC45-212ENST00000493724 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
CDC45-212ENST00000493724 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
CDC45-212ENST00000493724 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
CDC45-212ENST00000493724 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
CDC45-212ENST00000493724 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
CDC45-212ENST00000493724 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
CDC45-212ENST00000493724 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
CDC45-212ENST00000493724 NCAPD3P42695 1498 aa24.99■■□□□ 1.59
CDC45-212ENST00000493724 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
CDC45-212ENST00000493724 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
CDC45-212ENST00000493724 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
CDC45-212ENST00000493724 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
CDC45-212ENST00000493724 WIZO95785 1651 aa24.81■■□□□ 1.56
CDC45-212ENST00000493724 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
CDC45-212ENST00000493724 NESP48681 1621 aa24.53■■□□□ 1.52
CDC45-212ENST00000493724 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
CDC45-212ENST00000493724 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
CDC45-212ENST00000493724 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
CDC45-212ENST00000493724 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
CDC45-212ENST00000493724 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
CDC45-212ENST00000493724 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
CDC45-212ENST00000493724 CUX2O14529 1486 aa24.22■■□□□ 1.47
CDC45-212ENST00000493724 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
CDC45-212ENST00000493724 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
CDC45-212ENST00000493724 CFTRP13569 1480 aa24.12■■□□□ 1.45
CDC45-212ENST00000493724 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
CDC45-212ENST00000493724 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
CDC45-212ENST00000493724 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
CDC45-212ENST00000493724 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
CDC45-212ENST00000493724 WDR62O43379 1518 aa24■■□□□ 1.43
CDC45-212ENST00000493724 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
CDC45-212ENST00000493724 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
CDC45-212ENST00000493724 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
CDC45-212ENST00000493724 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
CDC45-212ENST00000493724 ABCC8Q09428 1581 aa23.58■■□□□ 1.37
CDC45-212ENST00000493724 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
CDC45-212ENST00000493724 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
CDC45-212ENST00000493724 DNAJC5Q9H3Z4 198 aa23.49■■□□□ 1.35
CDC45-212ENST00000493724 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
CDC45-212ENST00000493724 CUX1P39880 1505 aa23.47■■□□□ 1.35
CDC45-212ENST00000493724 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
CDC45-212ENST00000493724 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
CDC45-212ENST00000493724 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.34
CDC45-212ENST00000493724 WDR97A6NE52 1622 aa23.39■■□□□ 1.33
CDC45-212ENST00000493724 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
CDC45-212ENST00000493724 BIVM-ERCC5R4GMW8 1640 aa23.33■■□□□ 1.32
CDC45-212ENST00000493724 CHD1O14646 1710 aa23.29■■□□□ 1.32
CDC45-212ENST00000493724 SYNJ1O43426 1573 aa23.28■■□□□ 1.32
CDC45-212ENST00000493724 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
CDC45-212ENST00000493724 SOGA1O94964 1423 aa23.26■■□□□ 1.31
CDC45-212ENST00000493724 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
CDC45-212ENST00000493724 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.312e-9■■■■■ 88.3
CDC45-212ENST00000493724 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
CDC45-212ENST00000493724 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
CDC45-212ENST00000493724 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
CDC45-212ENST00000493724 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
CDC45-212ENST00000493724 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
CDC45-212ENST00000493724 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
CDC45-212ENST00000493724 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
CDC45-212ENST00000493724 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
CDC45-212ENST00000493724 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
CDC45-212ENST00000493724 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
CDC45-212ENST00000493724 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
CDC45-212ENST00000493724 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
CDC45-212ENST00000493724 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
CDC45-212ENST00000493724 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
CDC45-212ENST00000493724 FBLN2P98095 1184 aa22.92■■□□□ 1.26
CDC45-212ENST00000493724 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
CDC45-212ENST00000493724 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CDC45-212ENST00000493724 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
CDC45-212ENST00000493724 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
CDC45-212ENST00000493724 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
CDC45-212ENST00000493724 CEP170Q5SW79 1584 aa22.77■■□□□ 1.24
CDC45-212ENST00000493724 CUL7Q14999 1698 aa22.74■■□□□ 1.23
CDC45-212ENST00000493724 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CDC45-212ENST00000493724 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
CDC45-212ENST00000493724 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
CDC45-212ENST00000493724 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
CDC45-212ENST00000493724 NUP160Q12769 1436 aa22.66■■□□□ 1.22
CDC45-212ENST00000493724 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
CDC45-212ENST00000493724 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
CDC45-212ENST00000493724 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
CDC45-212ENST00000493724 IGF1RP08069 1367 aa22.56■■□□□ 1.2
CDC45-212ENST00000493724 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
CDC45-212ENST00000493724 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms