RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
PDCD11-206ENST00000493610 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
PDCD11-206ENST00000493610 ABCC9O60706 1549 aa29.57■■■□□ 2.32
PDCD11-206ENST00000493610 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
PDCD11-206ENST00000493610 NACADO15069 1562 aa28.29■■■□□ 2.12
PDCD11-206ENST00000493610 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
PDCD11-206ENST00000493610 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
PDCD11-206ENST00000493610 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
PDCD11-206ENST00000493610 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
PDCD11-206ENST00000493610 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
PDCD11-206ENST00000493610 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PDCD11-206ENST00000493610 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
PDCD11-206ENST00000493610 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
PDCD11-206ENST00000493610 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
PDCD11-206ENST00000493610 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
PDCD11-206ENST00000493610 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
PDCD11-206ENST00000493610 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
PDCD11-206ENST00000493610 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
PDCD11-206ENST00000493610 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
PDCD11-206ENST00000493610 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
PDCD11-206ENST00000493610 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
PDCD11-206ENST00000493610 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
PDCD11-206ENST00000493610 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
PDCD11-206ENST00000493610 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
PDCD11-206ENST00000493610 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
PDCD11-206ENST00000493610 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
PDCD11-206ENST00000493610 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
PDCD11-206ENST00000493610 WIZO95785 1651 aa25.79■■□□□ 1.72
PDCD11-206ENST00000493610 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
PDCD11-206ENST00000493610 NESP48681 1621 aa25.61■■□□□ 1.69
PDCD11-206ENST00000493610 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
PDCD11-206ENST00000493610 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
PDCD11-206ENST00000493610 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
PDCD11-206ENST00000493610 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
PDCD11-206ENST00000493610 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
PDCD11-206ENST00000493610 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
PDCD11-206ENST00000493610 CUX2O14529 1486 aa25.24■■□□□ 1.63
PDCD11-206ENST00000493610 CFTRP13569 1480 aa25.21■■□□□ 1.63
PDCD11-206ENST00000493610 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.63
PDCD11-206ENST00000493610 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
PDCD11-206ENST00000493610 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
PDCD11-206ENST00000493610 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
PDCD11-206ENST00000493610 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
PDCD11-206ENST00000493610 WDR62O43379 1518 aa25■■□□□ 1.59
PDCD11-206ENST00000493610 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
PDCD11-206ENST00000493610 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
PDCD11-206ENST00000493610 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
PDCD11-206ENST00000493610 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
PDCD11-206ENST00000493610 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
PDCD11-206ENST00000493610 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
PDCD11-206ENST00000493610 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
PDCD11-206ENST00000493610 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
PDCD11-206ENST00000493610 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
PDCD11-206ENST00000493610 CUX1P39880 1505 aa24.47■■□□□ 1.51
PDCD11-206ENST00000493610 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
PDCD11-206ENST00000493610 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
PDCD11-206ENST00000493610 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
PDCD11-206ENST00000493610 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
PDCD11-206ENST00000493610 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
PDCD11-206ENST00000493610 SOGA1O94964 1423 aa24.29■■□□□ 1.48
PDCD11-206ENST00000493610 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.483e-6■■■■■ 27.5
PDCD11-206ENST00000493610 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
PDCD11-206ENST00000493610 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
PDCD11-206ENST00000493610 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
PDCD11-206ENST00000493610 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
PDCD11-206ENST00000493610 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
PDCD11-206ENST00000493610 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
PDCD11-206ENST00000493610 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
PDCD11-206ENST00000493610 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
PDCD11-206ENST00000493610 CHD1O14646 1710 aa24.08■■□□□ 1.45
PDCD11-206ENST00000493610 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
PDCD11-206ENST00000493610 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
PDCD11-206ENST00000493610 GRIN2BQ13224 1484 aa24.02■■□□□ 1.44
PDCD11-206ENST00000493610 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
PDCD11-206ENST00000493610 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
PDCD11-206ENST00000493610 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
PDCD11-206ENST00000493610 SYNJ2O15056 1496 aa23.89■■□□□ 1.42
PDCD11-206ENST00000493610 FBLN2P98095 1184 aa23.87■■□□□ 1.41
PDCD11-206ENST00000493610 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
PDCD11-206ENST00000493610 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
PDCD11-206ENST00000493610 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
PDCD11-206ENST00000493610 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
PDCD11-206ENST00000493610 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
PDCD11-206ENST00000493610 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
PDCD11-206ENST00000493610 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
PDCD11-206ENST00000493610 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
PDCD11-206ENST00000493610 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
PDCD11-206ENST00000493610 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PDCD11-206ENST00000493610 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
PDCD11-206ENST00000493610 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
PDCD11-206ENST00000493610 NUP160Q12769 1436 aa23.68■■□□□ 1.38
PDCD11-206ENST00000493610 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
PDCD11-206ENST00000493610 IGF1RP08069 1367 aa23.65■■□□□ 1.38
PDCD11-206ENST00000493610 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
PDCD11-206ENST00000493610 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
PDCD11-206ENST00000493610 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
PDCD11-206ENST00000493610 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
PDCD11-206ENST00000493610 CUL7Q14999 1698 aa23.54■■□□□ 1.36
PDCD11-206ENST00000493610 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
PDCD11-206ENST00000493610 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms