RNA–Protein interactions for RNA: ENST00000493059.1

GSK3A-204, Transcript of glycogen synthase kinase 3 alpha, humanhuman

TSL 2

Gene GSK3A, Length 761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-204ENST00000493059 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
GSK3A-204ENST00000493059 ABCC9O60706 1549 aa26.65■■□□□ 1.86
GSK3A-204ENST00000493059 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
GSK3A-204ENST00000493059 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
GSK3A-204ENST00000493059 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
GSK3A-204ENST00000493059 NACADO15069 1562 aa24.9■■□□□ 1.58
GSK3A-204ENST00000493059 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
GSK3A-204ENST00000493059 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
GSK3A-204ENST00000493059 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
GSK3A-204ENST00000493059 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
GSK3A-204ENST00000493059 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
GSK3A-204ENST00000493059 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
GSK3A-204ENST00000493059 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
GSK3A-204ENST00000493059 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
GSK3A-204ENST00000493059 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
GSK3A-204ENST00000493059 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
GSK3A-204ENST00000493059 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
GSK3A-204ENST00000493059 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
GSK3A-204ENST00000493059 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
GSK3A-204ENST00000493059 CUX2O14529 1486 aa23.13■■□□□ 1.29
GSK3A-204ENST00000493059 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
GSK3A-204ENST00000493059 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
GSK3A-204ENST00000493059 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
GSK3A-204ENST00000493059 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
GSK3A-204ENST00000493059 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
GSK3A-204ENST00000493059 NESP48681 1621 aa22.76■■□□□ 1.23
GSK3A-204ENST00000493059 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
GSK3A-204ENST00000493059 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
GSK3A-204ENST00000493059 THOC2Q8NI27 1593 aaKnown RBP22.62■■□□□ 1.21
GSK3A-204ENST00000493059 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
GSK3A-204ENST00000493059 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
GSK3A-204ENST00000493059 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
GSK3A-204ENST00000493059 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
GSK3A-204ENST00000493059 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
GSK3A-204ENST00000493059 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
GSK3A-204ENST00000493059 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
GSK3A-204ENST00000493059 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
GSK3A-204ENST00000493059 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
GSK3A-204ENST00000493059 WDR62O43379 1518 aa22.22■■□□□ 1.15
GSK3A-204ENST00000493059 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
GSK3A-204ENST00000493059 WIZO95785 1651 aa22.09■■□□□ 1.13
GSK3A-204ENST00000493059 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
GSK3A-204ENST00000493059 OSCARQ8IYS5 282 aa22■■□□□ 1.11
GSK3A-204ENST00000493059 CFTRP13569 1480 aa21.94■■□□□ 1.1
GSK3A-204ENST00000493059 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
GSK3A-204ENST00000493059 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
GSK3A-204ENST00000493059 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
GSK3A-204ENST00000493059 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
GSK3A-204ENST00000493059 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
GSK3A-204ENST00000493059 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
GSK3A-204ENST00000493059 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
GSK3A-204ENST00000493059 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
GSK3A-204ENST00000493059 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
GSK3A-204ENST00000493059 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
GSK3A-204ENST00000493059 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
GSK3A-204ENST00000493059 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
GSK3A-204ENST00000493059 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
GSK3A-204ENST00000493059 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
GSK3A-204ENST00000493059 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
GSK3A-204ENST00000493059 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
GSK3A-204ENST00000493059 CHD1O14646 1710 aa21.44■■□□□ 1.02
GSK3A-204ENST00000493059 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
GSK3A-204ENST00000493059 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.025e-6■■■□□ 16.9
GSK3A-204ENST00000493059 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
GSK3A-204ENST00000493059 FBLN2P98095 1184 aa21.4■■□□□ 1.02
GSK3A-204ENST00000493059 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
GSK3A-204ENST00000493059 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
GSK3A-204ENST00000493059 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
GSK3A-204ENST00000493059 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
GSK3A-204ENST00000493059 SOGA1O94964 1423 aa21.23■□□□□ 0.99
GSK3A-204ENST00000493059 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
GSK3A-204ENST00000493059 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
GSK3A-204ENST00000493059 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
GSK3A-204ENST00000493059 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
GSK3A-204ENST00000493059 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
GSK3A-204ENST00000493059 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
GSK3A-204ENST00000493059 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
GSK3A-204ENST00000493059 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
GSK3A-204ENST00000493059 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
GSK3A-204ENST00000493059 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
GSK3A-204ENST00000493059 CUX1P39880 1505 aa21.05■□□□□ 0.96
GSK3A-204ENST00000493059 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
GSK3A-204ENST00000493059 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
GSK3A-204ENST00000493059 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
GSK3A-204ENST00000493059 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
GSK3A-204ENST00000493059 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
GSK3A-204ENST00000493059 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
GSK3A-204ENST00000493059 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
GSK3A-204ENST00000493059 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
GSK3A-204ENST00000493059 NUP160Q12769 1436 aa20.76■□□□□ 0.91
GSK3A-204ENST00000493059 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
GSK3A-204ENST00000493059 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
GSK3A-204ENST00000493059 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
GSK3A-204ENST00000493059 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
GSK3A-204ENST00000493059 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
GSK3A-204ENST00000493059 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
GSK3A-204ENST00000493059 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
GSK3A-204ENST00000493059 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
GSK3A-204ENST00000493059 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
GSK3A-204ENST00000493059 JPH4Q96JJ6 628 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms