RNA–Protein interactions for RNA: ENST00000493054.5

USP21-210, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 5

Gene USP21, Length 770 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-210ENST00000493054 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
USP21-210ENST00000493054 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
USP21-210ENST00000493054 ABCC9O60706 1549 aa24.15■■□□□ 1.46
USP21-210ENST00000493054 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
USP21-210ENST00000493054 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
USP21-210ENST00000493054 NACADO15069 1562 aa23.4■■□□□ 1.34
USP21-210ENST00000493054 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
USP21-210ENST00000493054 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
USP21-210ENST00000493054 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
USP21-210ENST00000493054 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
USP21-210ENST00000493054 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
USP21-210ENST00000493054 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
USP21-210ENST00000493054 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
USP21-210ENST00000493054 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
USP21-210ENST00000493054 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
USP21-210ENST00000493054 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
USP21-210ENST00000493054 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
USP21-210ENST00000493054 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
USP21-210ENST00000493054 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
USP21-210ENST00000493054 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
USP21-210ENST00000493054 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
USP21-210ENST00000493054 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
USP21-210ENST00000493054 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
USP21-210ENST00000493054 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
USP21-210ENST00000493054 WIZO95785 1651 aa21.54■■□□□ 1.04
USP21-210ENST00000493054 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
USP21-210ENST00000493054 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
USP21-210ENST00000493054 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
USP21-210ENST00000493054 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
USP21-210ENST00000493054 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
USP21-210ENST00000493054 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
USP21-210ENST00000493054 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
USP21-210ENST00000493054 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
USP21-210ENST00000493054 NESP48681 1621 aa20.96■□□□□ 0.95
USP21-210ENST00000493054 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
USP21-210ENST00000493054 CFTRP13569 1480 aa20.87■□□□□ 0.93
USP21-210ENST00000493054 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
USP21-210ENST00000493054 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
USP21-210ENST00000493054 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
USP21-210ENST00000493054 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
USP21-210ENST00000493054 FANCD2Q9BXW9 1451 aa20.72■□□□□ 0.91
USP21-210ENST00000493054 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
USP21-210ENST00000493054 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
USP21-210ENST00000493054 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
USP21-210ENST00000493054 WDR62O43379 1518 aa20.52■□□□□ 0.87
USP21-210ENST00000493054 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
USP21-210ENST00000493054 CUX2O14529 1486 aa20.47■□□□□ 0.87
USP21-210ENST00000493054 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
USP21-210ENST00000493054 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
USP21-210ENST00000493054 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
USP21-210ENST00000493054 CUX1P39880 1505 aa20.37■□□□□ 0.85
USP21-210ENST00000493054 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
USP21-210ENST00000493054 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
USP21-210ENST00000493054 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
USP21-210ENST00000493054 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
USP21-210ENST00000493054 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
USP21-210ENST00000493054 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
USP21-210ENST00000493054 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
USP21-210ENST00000493054 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
USP21-210ENST00000493054 SOGA1O94964 1423 aa20.17■□□□□ 0.82
USP21-210ENST00000493054 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
USP21-210ENST00000493054 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
USP21-210ENST00000493054 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
USP21-210ENST00000493054 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
USP21-210ENST00000493054 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
USP21-210ENST00000493054 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
USP21-210ENST00000493054 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.797e-10■■■■□ 21.6
USP21-210ENST00000493054 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
USP21-210ENST00000493054 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
USP21-210ENST00000493054 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
USP21-210ENST00000493054 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
USP21-210ENST00000493054 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
USP21-210ENST00000493054 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
USP21-210ENST00000493054 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
USP21-210ENST00000493054 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
USP21-210ENST00000493054 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
USP21-210ENST00000493054 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
USP21-210ENST00000493054 CHD1O14646 1710 aa19.81■□□□□ 0.76
USP21-210ENST00000493054 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
USP21-210ENST00000493054 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
USP21-210ENST00000493054 CUL7Q14999 1698 aa19.76■□□□□ 0.75
USP21-210ENST00000493054 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
USP21-210ENST00000493054 FHAD1B1AJZ9 1412 aa19.73■□□□□ 0.75
USP21-210ENST00000493054 IGF1RP08069 1367 aa19.72■□□□□ 0.75
USP21-210ENST00000493054 FBLN2P98095 1184 aa19.72■□□□□ 0.75
USP21-210ENST00000493054 CHMP7Q8WUX9 453 aaPredicted RBP19.7■□□□□ 0.74
USP21-210ENST00000493054 EEA1Q15075 1411 aa19.69■□□□□ 0.74
USP21-210ENST00000493054 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
USP21-210ENST00000493054 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.73
USP21-210ENST00000493054 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
USP21-210ENST00000493054 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
USP21-210ENST00000493054 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
USP21-210ENST00000493054 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
USP21-210ENST00000493054 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
USP21-210ENST00000493054 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
USP21-210ENST00000493054 NUP160Q12769 1436 aa19.55■□□□□ 0.72
USP21-210ENST00000493054 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
USP21-210ENST00000493054 KIF21BO75037 1637 aa19.5■□□□□ 0.71
USP21-210ENST00000493054 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
USP21-210ENST00000493054 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms