RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
PDCD4-210ENST00000492932 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
PDCD4-210ENST00000492932 ABCC9O60706 1549 aa25.7■■□□□ 1.7
PDCD4-210ENST00000492932 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
PDCD4-210ENST00000492932 NACADO15069 1562 aa24.37■■□□□ 1.49
PDCD4-210ENST00000492932 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
PDCD4-210ENST00000492932 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
PDCD4-210ENST00000492932 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
PDCD4-210ENST00000492932 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
PDCD4-210ENST00000492932 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
PDCD4-210ENST00000492932 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
PDCD4-210ENST00000492932 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
PDCD4-210ENST00000492932 BICRAQ9NZM4 1560 aa23.7■■□□□ 1.38
PDCD4-210ENST00000492932 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
PDCD4-210ENST00000492932 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
PDCD4-210ENST00000492932 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
PDCD4-210ENST00000492932 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
PDCD4-210ENST00000492932 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
PDCD4-210ENST00000492932 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
PDCD4-210ENST00000492932 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
PDCD4-210ENST00000492932 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
PDCD4-210ENST00000492932 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PDCD4-210ENST00000492932 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
PDCD4-210ENST00000492932 HMGXB3Q12766 1538 aa22.33■■□□□ 1.17
PDCD4-210ENST00000492932 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
PDCD4-210ENST00000492932 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
PDCD4-210ENST00000492932 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
PDCD4-210ENST00000492932 CUX2O14529 1486 aa22.15■■□□□ 1.14
PDCD4-210ENST00000492932 MROH2BQ7Z745 1585 aa22.13■■□□□ 1.13
PDCD4-210ENST00000492932 NESP48681 1621 aa22.06■■□□□ 1.12
PDCD4-210ENST00000492932 DNAJC5Q9H3Z4 198 aa22■■□□□ 1.11
PDCD4-210ENST00000492932 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
PDCD4-210ENST00000492932 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
PDCD4-210ENST00000492932 WIZO95785 1651 aa21.88■■□□□ 1.09
PDCD4-210ENST00000492932 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
PDCD4-210ENST00000492932 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
PDCD4-210ENST00000492932 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
PDCD4-210ENST00000492932 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
PDCD4-210ENST00000492932 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
PDCD4-210ENST00000492932 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
PDCD4-210ENST00000492932 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
PDCD4-210ENST00000492932 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.04
PDCD4-210ENST00000492932 WDR62O43379 1518 aa21.57■■□□□ 1.04
PDCD4-210ENST00000492932 CFTRP13569 1480 aa21.56■■□□□ 1.04
PDCD4-210ENST00000492932 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
PDCD4-210ENST00000492932 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
PDCD4-210ENST00000492932 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
PDCD4-210ENST00000492932 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PDCD4-210ENST00000492932 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
PDCD4-210ENST00000492932 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
PDCD4-210ENST00000492932 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
PDCD4-210ENST00000492932 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
PDCD4-210ENST00000492932 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
PDCD4-210ENST00000492932 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
PDCD4-210ENST00000492932 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
PDCD4-210ENST00000492932 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
PDCD4-210ENST00000492932 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
PDCD4-210ENST00000492932 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
PDCD4-210ENST00000492932 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.94
PDCD4-210ENST00000492932 SOGA1O94964 1423 aa20.88■□□□□ 0.93
PDCD4-210ENST00000492932 FBLN2P98095 1184 aa20.86■□□□□ 0.93
PDCD4-210ENST00000492932 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
PDCD4-210ENST00000492932 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
PDCD4-210ENST00000492932 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
PDCD4-210ENST00000492932 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
PDCD4-210ENST00000492932 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
PDCD4-210ENST00000492932 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
PDCD4-210ENST00000492932 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
PDCD4-210ENST00000492932 CHD1O14646 1710 aa20.8■□□□□ 0.92
PDCD4-210ENST00000492932 CUX1P39880 1505 aa20.79■□□□□ 0.92
PDCD4-210ENST00000492932 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
PDCD4-210ENST00000492932 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
PDCD4-210ENST00000492932 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
PDCD4-210ENST00000492932 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
PDCD4-210ENST00000492932 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
PDCD4-210ENST00000492932 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
PDCD4-210ENST00000492932 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
PDCD4-210ENST00000492932 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
PDCD4-210ENST00000492932 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
PDCD4-210ENST00000492932 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
PDCD4-210ENST00000492932 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
PDCD4-210ENST00000492932 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
PDCD4-210ENST00000492932 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
PDCD4-210ENST00000492932 CLASP1Q7Z460 1538 aa20.54■□□□□ 0.88
PDCD4-210ENST00000492932 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
PDCD4-210ENST00000492932 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
PDCD4-210ENST00000492932 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
PDCD4-210ENST00000492932 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
PDCD4-210ENST00000492932 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
PDCD4-210ENST00000492932 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
PDCD4-210ENST00000492932 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
PDCD4-210ENST00000492932 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
PDCD4-210ENST00000492932 NUP160Q12769 1436 aa20.31■□□□□ 0.84
PDCD4-210ENST00000492932 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
PDCD4-210ENST00000492932 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
PDCD4-210ENST00000492932 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
PDCD4-210ENST00000492932 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
PDCD4-210ENST00000492932 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
PDCD4-210ENST00000492932 PRG4Q92954 1404 aaPredicted RBP20.16■□□□□ 0.82
PDCD4-210ENST00000492932 CUL7Q14999 1698 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms