RNA–Protein interactions for RNA: ENST00000492638.1

RRP1-206, Transcript of ribosomal RNA processing 1, humanhuman

TSL 2

Gene RRP1, Length 1,017 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-206ENST00000492638 NISCHQ9Y2I1 1504 aa40.93■■■■■ 4.14
RRP1-206ENST00000492638 ABCC9O60706 1549 aa36.99■■■■□ 3.51
RRP1-206ENST00000492638 CCDC180Q9P1Z9 1646 aa36.71■■■■□ 3.47
RRP1-206ENST00000492638 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
RRP1-206ENST00000492638 DCAF8L2P0C7V8 631 aa34.82■■■■□ 3.16
RRP1-206ENST00000492638 NACADO15069 1562 aa34.81■■■■□ 3.16
RRP1-206ENST00000492638 DNAJC5BQ9UF47 199 aa34.78■■■■□ 3.16
RRP1-206ENST00000492638 PABPN1Q86U42 306 aaKnown RBP eCLIP34.47■■■■□ 3.11
RRP1-206ENST00000492638 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
RRP1-206ENST00000492638 UNC13AQ9UPW8 1703 aa34.14■■■■□ 3.06
RRP1-206ENST00000492638 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
RRP1-206ENST00000492638 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
RRP1-206ENST00000492638 DCAF1Q9Y4B6 1507 aa33.76■■■■□ 3
RRP1-206ENST00000492638 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
RRP1-206ENST00000492638 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
RRP1-206ENST00000492638 CECR2Q9BXF3 1484 aa33.34■■■□□ 2.93
RRP1-206ENST00000492638 CC2D2AQ9P2K1 1620 aa33.34■■■□□ 2.93
RRP1-206ENST00000492638 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
RRP1-206ENST00000492638 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
RRP1-206ENST00000492638 DNAJC5Q9H3Z4 198 aa32.09■■■□□ 2.73
RRP1-206ENST00000492638 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
RRP1-206ENST00000492638 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
RRP1-206ENST00000492638 SMARCA2P51531 1590 aa31.95■■■□□ 2.71
RRP1-206ENST00000492638 SMARCA4P51532 1647 aa31.93■■■□□ 2.7
RRP1-206ENST00000492638 CUX2O14529 1486 aa31.91■■■□□ 2.7
RRP1-206ENST00000492638 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
RRP1-206ENST00000492638 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
RRP1-206ENST00000492638 BAZ1BQ9UIG0 1483 aaKnown RBP31.76■■■□□ 2.67
RRP1-206ENST00000492638 NESP48681 1621 aa31.69■■■□□ 2.66
RRP1-206ENST00000492638 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
RRP1-206ENST00000492638 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
RRP1-206ENST00000492638 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
RRP1-206ENST00000492638 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
RRP1-206ENST00000492638 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
RRP1-206ENST00000492638 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
RRP1-206ENST00000492638 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
RRP1-206ENST00000492638 WIZO95785 1651 aa31.12■■■□□ 2.57
RRP1-206ENST00000492638 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
RRP1-206ENST00000492638 WDR62O43379 1518 aa30.92■■■□□ 2.54
RRP1-206ENST00000492638 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
RRP1-206ENST00000492638 FANCD2Q9BXW9 1451 aa30.85■■■□□ 2.53
RRP1-206ENST00000492638 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
RRP1-206ENST00000492638 CFTRP13569 1480 aa30.78■■■□□ 2.52
RRP1-206ENST00000492638 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
RRP1-206ENST00000492638 TRIM41Q8WV44 630 aa30.73■■■□□ 2.51
RRP1-206ENST00000492638 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
RRP1-206ENST00000492638 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
RRP1-206ENST00000492638 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
RRP1-206ENST00000492638 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
RRP1-206ENST00000492638 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
RRP1-206ENST00000492638 ZNF608Q9ULD9 1512 aaPredicted RBP30.23■■■□□ 2.43
RRP1-206ENST00000492638 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
RRP1-206ENST00000492638 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
RRP1-206ENST00000492638 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
RRP1-206ENST00000492638 EIF4G3O43432 1585 aaKnown RBP30.03■■■□□ 2.4
RRP1-206ENST00000492638 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
RRP1-206ENST00000492638 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
RRP1-206ENST00000492638 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
RRP1-206ENST00000492638 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.393e-13■■■■■ 32.3
RRP1-206ENST00000492638 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
RRP1-206ENST00000492638 FBLN2P98095 1184 aa29.93■■■□□ 2.38
RRP1-206ENST00000492638 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
RRP1-206ENST00000492638 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
RRP1-206ENST00000492638 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
RRP1-206ENST00000492638 SOGA1O94964 1423 aa29.83■■■□□ 2.37
RRP1-206ENST00000492638 RAD54L2Q9Y4B4 1467 aa29.82■■■□□ 2.36
RRP1-206ENST00000492638 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
RRP1-206ENST00000492638 CHD1O14646 1710 aa29.78■■■□□ 2.36
RRP1-206ENST00000492638 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
RRP1-206ENST00000492638 SNAPC4Q5SXM2 1469 aa29.66■■■□□ 2.34
RRP1-206ENST00000492638 CHMP7Q8WUX9 453 aaPredicted RBP29.65■■■□□ 2.34
RRP1-206ENST00000492638 CUX1P39880 1505 aa29.63■■■□□ 2.33
RRP1-206ENST00000492638 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
RRP1-206ENST00000492638 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
RRP1-206ENST00000492638 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
RRP1-206ENST00000492638 GRIN2BQ13224 1484 aa29.56■■■□□ 2.32
RRP1-206ENST00000492638 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
RRP1-206ENST00000492638 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
RRP1-206ENST00000492638 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
RRP1-206ENST00000492638 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
RRP1-206ENST00000492638 CLASP1Q7Z460 1538 aa29.46■■■□□ 2.31
RRP1-206ENST00000492638 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
RRP1-206ENST00000492638 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
RRP1-206ENST00000492638 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
RRP1-206ENST00000492638 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
RRP1-206ENST00000492638 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
RRP1-206ENST00000492638 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
RRP1-206ENST00000492638 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
RRP1-206ENST00000492638 ADAMTS12P58397 1594 aa29.09■■■□□ 2.25
RRP1-206ENST00000492638 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
RRP1-206ENST00000492638 FHAD1B1AJZ9 1412 aa29.07■■■□□ 2.24
RRP1-206ENST00000492638 NUP160Q12769 1436 aa29.04■■■□□ 2.24
RRP1-206ENST00000492638 CEP170Q5SW79 1584 aa29.02■■■□□ 2.24
RRP1-206ENST00000492638 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.23
RRP1-206ENST00000492638 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
RRP1-206ENST00000492638 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
RRP1-206ENST00000492638 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
RRP1-206ENST00000492638 PRG4Q92954 1404 aaPredicted RBP28.85■■■□□ 2.21
RRP1-206ENST00000492638 JPH4Q96JJ6 628 aa28.83■■■□□ 2.21
RRP1-206ENST00000492638 NPM1P06748 294 aaKnown RBP eCLIP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms