RNA–Protein interactions for RNA: ENST00000492419.1

TMEM230-209, Transcript of transmembrane protein 230, humanhuman

TSL 3

Gene TMEM230, Length 1,730 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM230-209ENST00000492419 NISCHQ9Y2I1 1504 aa47.27■■■■■ 5.16
TMEM230-209ENST00000492419 CCDC180Q9P1Z9 1646 aa41.7■■■■■ 4.27
TMEM230-209ENST00000492419 ABCC9O60706 1549 aa40.46■■■■■ 4.07
TMEM230-209ENST00000492419 DCAF8L2P0C7V8 631 aa39.52■■■■□ 3.92
TMEM230-209ENST00000492419 ZCCHC6Q5VYS8 1495 aaKnown RBP39.47■■■■□ 3.91
TMEM230-209ENST00000492419 NACADO15069 1562 aa39.12■■■■□ 3.85
TMEM230-209ENST00000492419 RB1CC1Q8TDY2 1594 aa39.05■■■■□ 3.84
TMEM230-209ENST00000492419 DCAF1Q9Y4B6 1507 aa39.05■■■■□ 3.84
TMEM230-209ENST00000492419 MYO15BQ96JP2 1530 aa39■■■■□ 3.83
TMEM230-209ENST00000492419 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
TMEM230-209ENST00000492419 UNC13AQ9UPW8 1703 aa38.17■■■■□ 3.7
TMEM230-209ENST00000492419 PABPN1Q86U42 306 aaKnown RBP eCLIP37.96■■■■□ 3.67
TMEM230-209ENST00000492419 SHROOM4Q9ULL8 1493 aa37.86■■■■□ 3.65
TMEM230-209ENST00000492419 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
TMEM230-209ENST00000492419 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
TMEM230-209ENST00000492419 CECR2Q9BXF3 1484 aa36.82■■■■□ 3.48
TMEM230-209ENST00000492419 DNAJC5BQ9UF47 199 aa36.66■■■■□ 3.46
TMEM230-209ENST00000492419 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
TMEM230-209ENST00000492419 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
TMEM230-209ENST00000492419 SMARCA4P51532 1647 aa36.55■■■■□ 3.44
TMEM230-209ENST00000492419 MROH2BQ7Z745 1585 aa36.47■■■■□ 3.43
TMEM230-209ENST00000492419 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
TMEM230-209ENST00000492419 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
TMEM230-209ENST00000492419 SMARCA2P51531 1590 aa36.2■■■■□ 3.39
TMEM230-209ENST00000492419 PEG3Q9GZU2 1588 aa36.13■■■■□ 3.37
TMEM230-209ENST00000492419 WIZO95785 1651 aa36.11■■■■□ 3.37
TMEM230-209ENST00000492419 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
TMEM230-209ENST00000492419 BAZ1BQ9UIG0 1483 aaKnown RBP36■■■■□ 3.35
TMEM230-209ENST00000492419 HMGXB3Q12766 1538 aa35.95■■■■□ 3.35
TMEM230-209ENST00000492419 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
TMEM230-209ENST00000492419 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
TMEM230-209ENST00000492419 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
TMEM230-209ENST00000492419 NESP48681 1621 aa35.16■■■■□ 3.22
TMEM230-209ENST00000492419 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
TMEM230-209ENST00000492419 LAMC3Q9Y6N6 1575 aa35.06■■■■□ 3.2
TMEM230-209ENST00000492419 CFTRP13569 1480 aa35.01■■■■□ 3.19
TMEM230-209ENST00000492419 PDS5BQ9NTI5 1447 aa34.87■■■■□ 3.17
TMEM230-209ENST00000492419 ERCC6Q03468 1493 aa34.83■■■■□ 3.17
TMEM230-209ENST00000492419 FANCD2Q9BXW9 1451 aa34.73■■■■□ 3.15
TMEM230-209ENST00000492419 PRDM2Q13029 1718 aa34.72■■■■□ 3.15
TMEM230-209ENST00000492419 KIF21AQ7Z4S6 1674 aa34.71■■■■□ 3.15
TMEM230-209ENST00000492419 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
TMEM230-209ENST00000492419 MRC2Q9UBG0 1479 aa34.45■■■■□ 3.11
TMEM230-209ENST00000492419 THOC2Q8NI27 1593 aaKnown RBP34.42■■■■□ 3.1
TMEM230-209ENST00000492419 URB2Q14146 1524 aaKnown RBP34.34■■■■□ 3.09
TMEM230-209ENST00000492419 WDR62O43379 1518 aa34.28■■■■□ 3.08
TMEM230-209ENST00000492419 ABCC8Q09428 1581 aa34.26■■■■□ 3.07
TMEM230-209ENST00000492419 TOPBP1Q92547 1522 aa34.23■■■■□ 3.07
TMEM230-209ENST00000492419 DNMBPQ6XZF7 1577 aa34.21■■■■□ 3.07
TMEM230-209ENST00000492419 WRNQ14191 1432 aaPredicted RBP eCLIP34.18■■■■□ 3.06
TMEM230-209ENST00000492419 CUX1P39880 1505 aa34.17■■■■□ 3.06
TMEM230-209ENST00000492419 CUX2O14529 1486 aa34.16■■■■□ 3.06
TMEM230-209ENST00000492419 SYNJ1O43426 1573 aa34.04■■■■□ 3.04
TMEM230-209ENST00000492419 TOP2BQ02880 1626 aa34■■■■□ 3.03
TMEM230-209ENST00000492419 FGD5Q6ZNL6 1462 aa33.99■■■■□ 3.03
TMEM230-209ENST00000492419 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
TMEM230-209ENST00000492419 BIVM-ERCC5R4GMW8 1640 aa33.96■■■■□ 3.03
TMEM230-209ENST00000492419 SOGA1O94964 1423 aa33.89■■■■□ 3.02
TMEM230-209ENST00000492419 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
TMEM230-209ENST00000492419 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
TMEM230-209ENST00000492419 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
TMEM230-209ENST00000492419 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
TMEM230-209ENST00000492419 CHIC1Q5VXU3 224 aa33.76■■■■□ 3
TMEM230-209ENST00000492419 ZNF608Q9ULD9 1512 aaPredicted RBP33.71■■■□□ 2.99
TMEM230-209ENST00000492419 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
TMEM230-209ENST00000492419 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
TMEM230-209ENST00000492419 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.97
TMEM230-209ENST00000492419 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
TMEM230-209ENST00000492419 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
TMEM230-209ENST00000492419 GAPVD1Q14C86 1478 aa33.49■■■□□ 2.95
TMEM230-209ENST00000492419 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
TMEM230-209ENST00000492419 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
TMEM230-209ENST00000492419 GRIN2BQ13224 1484 aa33.38■■■□□ 2.93
TMEM230-209ENST00000492419 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
TMEM230-209ENST00000492419 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
TMEM230-209ENST00000492419 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
TMEM230-209ENST00000492419 ERICH3Q5RHP9 1530 aa33.25■■■□□ 2.91
TMEM230-209ENST00000492419 IGF1RP08069 1367 aa33.23■■■□□ 2.91
TMEM230-209ENST00000492419 MAGI1Q96QZ7 1491 aaPredicted RBP33.22■■■□□ 2.91
TMEM230-209ENST00000492419 FBLN2P98095 1184 aa33.22■■■□□ 2.91
TMEM230-209ENST00000492419 FAM9AQ8IZU1 332 aaPredicted RBP33.22■■■□□ 2.91
TMEM230-209ENST00000492419 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
TMEM230-209ENST00000492419 EEA1Q15075 1411 aa33.11■■■□□ 2.89
TMEM230-209ENST00000492419 SYNJ2O15056 1496 aa33.1■■■□□ 2.89
TMEM230-209ENST00000492419 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
TMEM230-209ENST00000492419 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
TMEM230-209ENST00000492419 CSRNP3Q8WYN3 585 aa33.08■■■□□ 2.89
TMEM230-209ENST00000492419 CARMIL1Q5VZK9 1371 aa33.06■■■□□ 2.88
TMEM230-209ENST00000492419 CUL7Q14999 1698 aa33.04■■■□□ 2.88
TMEM230-209ENST00000492419 CHD1O14646 1710 aa33.04■■■□□ 2.88
TMEM230-209ENST00000492419 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
TMEM230-209ENST00000492419 GRIN2AQ12879 1464 aa32.95■■■□□ 2.87
TMEM230-209ENST00000492419 RAPGEF2Q9Y4G8 1499 aa32.9■■■□□ 2.86
TMEM230-209ENST00000492419 PRXQ9BXM0 1461 aa32.88■■■□□ 2.85
TMEM230-209ENST00000492419 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
TMEM230-209ENST00000492419 CEP170Q5SW79 1584 aa32.77■■■□□ 2.84
TMEM230-209ENST00000492419 NUP160Q12769 1436 aa32.76■■■□□ 2.83
TMEM230-209ENST00000492419 KIF21BO75037 1637 aa32.7■■■□□ 2.83
TMEM230-209ENST00000492419 CLASP1Q7Z460 1538 aa32.65■■■□□ 2.82
TMEM230-209ENST00000492419 GOLGA3Q08378 1498 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms