RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-223ENST00000492142 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
TRO-223ENST00000492142 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
TRO-223ENST00000492142 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
TRO-223ENST00000492142 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
TRO-223ENST00000492142 ABCC9O60706 1549 aa19.35■□□□□ 0.69
TRO-223ENST00000492142 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
TRO-223ENST00000492142 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
TRO-223ENST00000492142 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
TRO-223ENST00000492142 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
TRO-223ENST00000492142 NACADO15069 1562 aa18.76■□□□□ 0.59
TRO-223ENST00000492142 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
TRO-223ENST00000492142 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
TRO-223ENST00000492142 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
TRO-223ENST00000492142 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
TRO-223ENST00000492142 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
TRO-223ENST00000492142 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
TRO-223ENST00000492142 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRO-223ENST00000492142 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
TRO-223ENST00000492142 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
TRO-223ENST00000492142 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
TRO-223ENST00000492142 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
TRO-223ENST00000492142 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
TRO-223ENST00000492142 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
TRO-223ENST00000492142 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
TRO-223ENST00000492142 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
TRO-223ENST00000492142 FOXD1Q16676 465 aa17.48■□□□□ 0.39
TRO-223ENST00000492142 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
TRO-223ENST00000492142 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
TRO-223ENST00000492142 WIZO95785 1651 aa17.43■□□□□ 0.38
TRO-223ENST00000492142 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
TRO-223ENST00000492142 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
TRO-223ENST00000492142 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
TRO-223ENST00000492142 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
TRO-223ENST00000492142 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
TRO-223ENST00000492142 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
TRO-223ENST00000492142 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
TRO-223ENST00000492142 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
TRO-223ENST00000492142 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
TRO-223ENST00000492142 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
TRO-223ENST00000492142 NESP48681 1621 aa16.85■□□□□ 0.29
TRO-223ENST00000492142 CFTRP13569 1480 aa16.82■□□□□ 0.28
TRO-223ENST00000492142 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
TRO-223ENST00000492142 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
TRO-223ENST00000492142 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
TRO-223ENST00000492142 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
TRO-223ENST00000492142 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
TRO-223ENST00000492142 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
TRO-223ENST00000492142 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
TRO-223ENST00000492142 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
TRO-223ENST00000492142 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
TRO-223ENST00000492142 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
TRO-223ENST00000492142 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
TRO-223ENST00000492142 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
TRO-223ENST00000492142 CUX1P39880 1505 aa16.47■□□□□ 0.23
TRO-223ENST00000492142 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
TRO-223ENST00000492142 ADRA2BP18089 450 aa16.45■□□□□ 0.22
TRO-223ENST00000492142 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
TRO-223ENST00000492142 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
TRO-223ENST00000492142 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
TRO-223ENST00000492142 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
TRO-223ENST00000492142 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
TRO-223ENST00000492142 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
TRO-223ENST00000492142 WDR62O43379 1518 aa16.4■□□□□ 0.22
TRO-223ENST00000492142 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
TRO-223ENST00000492142 FGD5Q6ZNL6 1462 aa16.36■□□□□ 0.21
TRO-223ENST00000492142 MSH5O43196 834 aa16.36■□□□□ 0.21
TRO-223ENST00000492142 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
TRO-223ENST00000492142 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
TRO-223ENST00000492142 SOGA1O94964 1423 aa16.31■□□□□ 0.2
TRO-223ENST00000492142 CUX2O14529 1486 aa16.29■□□□□ 0.2
TRO-223ENST00000492142 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
TRO-223ENST00000492142 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
TRO-223ENST00000492142 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
TRO-223ENST00000492142 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
TRO-223ENST00000492142 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
TRO-223ENST00000492142 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
TRO-223ENST00000492142 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
TRO-223ENST00000492142 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
TRO-223ENST00000492142 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRO-223ENST00000492142 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
TRO-223ENST00000492142 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
TRO-223ENST00000492142 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
TRO-223ENST00000492142 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
TRO-223ENST00000492142 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
TRO-223ENST00000492142 EEA1Q15075 1411 aa16.06■□□□□ 0.16
TRO-223ENST00000492142 IGF1RP08069 1367 aa16.06■□□□□ 0.16
TRO-223ENST00000492142 GRIN2BQ13224 1484 aa16.03■□□□□ 0.16
TRO-223ENST00000492142 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
TRO-223ENST00000492142 PBRM1Q86U86 1689 aa16.01■□□□□ 0.15
TRO-223ENST00000492142 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
TRO-223ENST00000492142 CARMIL1Q5VZK9 1371 aa15.98■□□□□ 0.15
TRO-223ENST00000492142 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
TRO-223ENST00000492142 FBLN2P98095 1184 aa15.95■□□□□ 0.14
TRO-223ENST00000492142 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
TRO-223ENST00000492142 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
TRO-223ENST00000492142 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
TRO-223ENST00000492142 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
TRO-223ENST00000492142 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
TRO-223ENST00000492142 CUL7Q14999 1698 aa15.92■□□□□ 0.14
TRO-223ENST00000492142 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms