RNA–Protein interactions for RNA: ENST00000492035.1

HCN3-203, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 532 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-203ENST00000492035 NISCHQ9Y2I1 1504 aa24.37■■□□□ 1.49
HCN3-203ENST00000492035 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
HCN3-203ENST00000492035 ABCC9O60706 1549 aa21.21■□□□□ 0.99
HCN3-203ENST00000492035 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
HCN3-203ENST00000492035 NACADO15069 1562 aa20.38■□□□□ 0.85
HCN3-203ENST00000492035 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
HCN3-203ENST00000492035 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
HCN3-203ENST00000492035 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
HCN3-203ENST00000492035 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
HCN3-203ENST00000492035 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
HCN3-203ENST00000492035 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
HCN3-203ENST00000492035 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
HCN3-203ENST00000492035 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
HCN3-203ENST00000492035 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
HCN3-203ENST00000492035 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
HCN3-203ENST00000492035 EIF4G1Q04637 1599 aaKnown RBP19.29■□□□□ 0.68
HCN3-203ENST00000492035 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
HCN3-203ENST00000492035 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
HCN3-203ENST00000492035 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
HCN3-203ENST00000492035 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
HCN3-203ENST00000492035 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
HCN3-203ENST00000492035 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
HCN3-203ENST00000492035 MROH2BQ7Z745 1585 aa18.79■□□□□ 0.6
HCN3-203ENST00000492035 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
HCN3-203ENST00000492035 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
HCN3-203ENST00000492035 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
HCN3-203ENST00000492035 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
HCN3-203ENST00000492035 WIZO95785 1651 aa18.6■□□□□ 0.57
HCN3-203ENST00000492035 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
HCN3-203ENST00000492035 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
HCN3-203ENST00000492035 NESP48681 1621 aa18.36■□□□□ 0.53
HCN3-203ENST00000492035 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
HCN3-203ENST00000492035 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
HCN3-203ENST00000492035 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
HCN3-203ENST00000492035 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
HCN3-203ENST00000492035 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
HCN3-203ENST00000492035 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
HCN3-203ENST00000492035 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
HCN3-203ENST00000492035 CFTRP13569 1480 aa18.13■□□□□ 0.49
HCN3-203ENST00000492035 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
HCN3-203ENST00000492035 CUX2O14529 1486 aa18.1■□□□□ 0.49
HCN3-203ENST00000492035 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
HCN3-203ENST00000492035 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
HCN3-203ENST00000492035 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
HCN3-203ENST00000492035 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
HCN3-203ENST00000492035 WDR62O43379 1518 aa17.97■□□□□ 0.47
HCN3-203ENST00000492035 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
HCN3-203ENST00000492035 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
HCN3-203ENST00000492035 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
HCN3-203ENST00000492035 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
HCN3-203ENST00000492035 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
HCN3-203ENST00000492035 CUX1P39880 1505 aa17.64■□□□□ 0.41
HCN3-203ENST00000492035 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
HCN3-203ENST00000492035 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
HCN3-203ENST00000492035 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
HCN3-203ENST00000492035 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
HCN3-203ENST00000492035 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
HCN3-203ENST00000492035 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
HCN3-203ENST00000492035 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
HCN3-203ENST00000492035 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
HCN3-203ENST00000492035 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
HCN3-203ENST00000492035 SOGA1O94964 1423 aa17.49■□□□□ 0.39
HCN3-203ENST00000492035 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
HCN3-203ENST00000492035 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
HCN3-203ENST00000492035 DNAJC5Q9H3Z4 198 aa17.47■□□□□ 0.39
HCN3-203ENST00000492035 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
HCN3-203ENST00000492035 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
HCN3-203ENST00000492035 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
HCN3-203ENST00000492035 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
HCN3-203ENST00000492035 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
HCN3-203ENST00000492035 CHD1O14646 1710 aa17.35■□□□□ 0.37
HCN3-203ENST00000492035 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
HCN3-203ENST00000492035 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
HCN3-203ENST00000492035 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
HCN3-203ENST00000492035 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
HCN3-203ENST00000492035 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
HCN3-203ENST00000492035 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
HCN3-203ENST00000492035 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
HCN3-203ENST00000492035 FBLN2P98095 1184 aa17.19■□□□□ 0.34
HCN3-203ENST00000492035 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
HCN3-203ENST00000492035 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
HCN3-203ENST00000492035 CLASP1Q7Z460 1538 aa17.12■□□□□ 0.33
HCN3-203ENST00000492035 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
HCN3-203ENST00000492035 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
HCN3-203ENST00000492035 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
HCN3-203ENST00000492035 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
HCN3-203ENST00000492035 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
HCN3-203ENST00000492035 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
HCN3-203ENST00000492035 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
HCN3-203ENST00000492035 CUL7Q14999 1698 aa17.07■□□□□ 0.32
HCN3-203ENST00000492035 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
HCN3-203ENST00000492035 NUP160Q12769 1436 aa17.04■□□□□ 0.32
HCN3-203ENST00000492035 IGF1RP08069 1367 aa17.02■□□□□ 0.31
HCN3-203ENST00000492035 TRIM41Q8WV44 630 aa17■□□□□ 0.31
HCN3-203ENST00000492035 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
HCN3-203ENST00000492035 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
HCN3-203ENST00000492035 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
HCN3-203ENST00000492035 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
HCN3-203ENST00000492035 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
HCN3-203ENST00000492035 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms