RNA–Protein interactions for RNA: ENST00000491206.5

RFC2-209, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-209ENST00000491206 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
RFC2-209ENST00000491206 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
RFC2-209ENST00000491206 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
RFC2-209ENST00000491206 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
RFC2-209ENST00000491206 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
RFC2-209ENST00000491206 FOXD1Q16676 465 aa14.54□□□□□ -0.08
RFC2-209ENST00000491206 MSH5O43196 834 aa14.05□□□□□ -0.16
RFC2-209ENST00000491206 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
RFC2-209ENST00000491206 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
RFC2-209ENST00000491206 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
RFC2-209ENST00000491206 ADRA2BP18089 450 aa12.93□□□□□ -0.34
RFC2-209ENST00000491206 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
RFC2-209ENST00000491206 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
RFC2-209ENST00000491206 DMRT2Q9Y5R5 561 aa12.21□□□□□ -0.45
RFC2-209ENST00000491206 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
RFC2-209ENST00000491206 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
RFC2-209ENST00000491206 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
RFC2-209ENST00000491206 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
RFC2-209ENST00000491206 ABCC9O60706 1549 aa11.7□□□□□ -0.54
RFC2-209ENST00000491206 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
RFC2-209ENST00000491206 POTEHQ6S545 545 aa11.54□□□□□ -0.56
RFC2-209ENST00000491206 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
RFC2-209ENST00000491206 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
RFC2-209ENST00000491206 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
RFC2-209ENST00000491206 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
RFC2-209ENST00000491206 PPP4R3CPQ6ZMV5 832 aa11.15□□□□□ -0.62
RFC2-209ENST00000491206 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
RFC2-209ENST00000491206 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
RFC2-209ENST00000491206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFC2-209ENST00000491206 ZCCHC6Q5VYS8 1495 aaKnown RBP11.03□□□□□ -0.64
RFC2-209ENST00000491206 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
RFC2-209ENST00000491206 CAPN15O75808 1086 aa10.83□□□□□ -0.68
RFC2-209ENST00000491206 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
RFC2-209ENST00000491206 DSG3P32926 999 aa10.8□□□□□ -0.68
RFC2-209ENST00000491206 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFC2-209ENST00000491206 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
RFC2-209ENST00000491206 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
RFC2-209ENST00000491206 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
RFC2-209ENST00000491206 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
RFC2-209ENST00000491206 MYO15BQ96JP2 1530 aa10.63□□□□□ -0.71
RFC2-209ENST00000491206 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
RFC2-209ENST00000491206 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
RFC2-209ENST00000491206 NACADO15069 1562 aa10.56□□□□□ -0.72
RFC2-209ENST00000491206 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
RFC2-209ENST00000491206 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
RFC2-209ENST00000491206 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
RFC2-209ENST00000491206 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
RFC2-209ENST00000491206 APLP2Q06481 763 aa10.48□□□□□ -0.73
RFC2-209ENST00000491206 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
RFC2-209ENST00000491206 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
RFC2-209ENST00000491206 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
RFC2-209ENST00000491206 ABCB7O75027 752 aa10.44□□□□□ -0.74
RFC2-209ENST00000491206 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
RFC2-209ENST00000491206 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
RFC2-209ENST00000491206 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
RFC2-209ENST00000491206 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
RFC2-209ENST00000491206 CUX2O14529 1486 aa10.34□□□□□ -0.75
RFC2-209ENST00000491206 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
RFC2-209ENST00000491206 NPM3O75607 178 aaKnown RBP10.31□□□□□ -0.76
RFC2-209ENST00000491206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
RFC2-209ENST00000491206 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
RFC2-209ENST00000491206 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
RFC2-209ENST00000491206 ERCC6Q03468 1493 aa10.15□□□□□ -0.78
RFC2-209ENST00000491206 HAX1O00165 279 aa10.13□□□□□ -0.79
RFC2-209ENST00000491206 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
RFC2-209ENST00000491206 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
RFC2-209ENST00000491206 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
RFC2-209ENST00000491206 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
RFC2-209ENST00000491206 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
RFC2-209ENST00000491206 SMARCA4P51532 1647 aa9.99□□□□□ -0.81
RFC2-209ENST00000491206 WIZO95785 1651 aa9.99□□□□□ -0.81
RFC2-209ENST00000491206 SLC4A2P04920 1241 aa9.97□□□□□ -0.81
RFC2-209ENST00000491206 POLA2Q14181 598 aa9.95□□□□□ -0.82
RFC2-209ENST00000491206 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
RFC2-209ENST00000491206 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
RFC2-209ENST00000491206 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
RFC2-209ENST00000491206 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
RFC2-209ENST00000491206 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
RFC2-209ENST00000491206 NESP48681 1621 aa9.87□□□□□ -0.83
RFC2-209ENST00000491206 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
RFC2-209ENST00000491206 LHX8Q68G74 356 aa9.83□□□□□ -0.84
RFC2-209ENST00000491206 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
RFC2-209ENST00000491206 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
RFC2-209ENST00000491206 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
RFC2-209ENST00000491206 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
RFC2-209ENST00000491206 RIMBP3CA6NJZ7 1639 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 RIMBP3BA6NNM3 1639 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 RIMBP3Q9UFD9 1639 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 NCAPD3P42695 1498 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 EVX2Q03828 476 aa9.74□□□□□ -0.85
RFC2-209ENST00000491206 ATAD2BQ9ULI0 1458 aa9.73□□□□□ -0.85
RFC2-209ENST00000491206 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
RFC2-209ENST00000491206 OSCARQ8IYS5 282 aa9.68□□□□□ -0.86
RFC2-209ENST00000491206 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
RFC2-209ENST00000491206 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
RFC2-209ENST00000491206 LOC105371045A0A1W2PR82 267 aa9.66□□□□□ -0.86
RFC2-209ENST00000491206 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.86
RFC2-209ENST00000491206 ABCC8Q09428 1581 aa9.65□□□□□ -0.86
RFC2-209ENST00000491206 ARHGEF11O15085 1522 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms