RNA–Protein interactions for RNA: ENST00000491202.5

ACTL6A-213, Transcript of actin like 6A, humanhuman

TSL 2

Gene ACTL6A, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-213ENST00000491202 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
ACTL6A-213ENST00000491202 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
ACTL6A-213ENST00000491202 ABCC9O60706 1549 aa33.7■■■□□ 2.99
ACTL6A-213ENST00000491202 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.75
ACTL6A-213ENST00000491202 NACADO15069 1562 aa32.06■■■□□ 2.72
ACTL6A-213ENST00000491202 DCAF8L2P0C7V8 631 aa32.04■■■□□ 2.72
ACTL6A-213ENST00000491202 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
ACTL6A-213ENST00000491202 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.63
ACTL6A-213ENST00000491202 PABPN1Q86U42 306 aaKnown RBP eCLIP31.45■■■□□ 2.63
ACTL6A-213ENST00000491202 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
ACTL6A-213ENST00000491202 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
ACTL6A-213ENST00000491202 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
ACTL6A-213ENST00000491202 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
ACTL6A-213ENST00000491202 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
ACTL6A-213ENST00000491202 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
ACTL6A-213ENST00000491202 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
ACTL6A-213ENST00000491202 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
ACTL6A-213ENST00000491202 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
ACTL6A-213ENST00000491202 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
ACTL6A-213ENST00000491202 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
ACTL6A-213ENST00000491202 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
ACTL6A-213ENST00000491202 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
ACTL6A-213ENST00000491202 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
ACTL6A-213ENST00000491202 HMGXB3Q12766 1538 aa29.37■■■□□ 2.29
ACTL6A-213ENST00000491202 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
ACTL6A-213ENST00000491202 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
ACTL6A-213ENST00000491202 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
ACTL6A-213ENST00000491202 ERCC6Q03468 1493 aa29.12■■■□□ 2.25
ACTL6A-213ENST00000491202 NESP48681 1621 aa29■■■□□ 2.23
ACTL6A-213ENST00000491202 CUX2O14529 1486 aa28.96■■■□□ 2.23
ACTL6A-213ENST00000491202 WIZO95785 1651 aa28.88■■■□□ 2.21
ACTL6A-213ENST00000491202 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
ACTL6A-213ENST00000491202 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
ACTL6A-213ENST00000491202 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
ACTL6A-213ENST00000491202 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
ACTL6A-213ENST00000491202 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
ACTL6A-213ENST00000491202 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
ACTL6A-213ENST00000491202 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
ACTL6A-213ENST00000491202 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
ACTL6A-213ENST00000491202 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
ACTL6A-213ENST00000491202 CFTRP13569 1480 aa28.43■■■□□ 2.14
ACTL6A-213ENST00000491202 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
ACTL6A-213ENST00000491202 FANCD2Q9BXW9 1451 aa28.38■■■□□ 2.13
ACTL6A-213ENST00000491202 WDR62O43379 1518 aa28.33■■■□□ 2.13
ACTL6A-213ENST00000491202 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
ACTL6A-213ENST00000491202 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
ACTL6A-213ENST00000491202 PRDM2Q13029 1718 aa28.08■■■□□ 2.09
ACTL6A-213ENST00000491202 ABCC8Q09428 1581 aa27.87■■■□□ 2.05
ACTL6A-213ENST00000491202 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
ACTL6A-213ENST00000491202 IFT140Q96RY7 1462 aa27.83■■■□□ 2.04
ACTL6A-213ENST00000491202 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
ACTL6A-213ENST00000491202 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
ACTL6A-213ENST00000491202 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
ACTL6A-213ENST00000491202 ZNF608Q9ULD9 1512 aaPredicted RBP27.71■■■□□ 2.03
ACTL6A-213ENST00000491202 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
ACTL6A-213ENST00000491202 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
ACTL6A-213ENST00000491202 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
ACTL6A-213ENST00000491202 TRIM41Q8WV44 630 aa27.53■■■□□ 2
ACTL6A-213ENST00000491202 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
ACTL6A-213ENST00000491202 SOGA1O94964 1423 aa27.52■■■□□ 2
ACTL6A-213ENST00000491202 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
ACTL6A-213ENST00000491202 CUX1P39880 1505 aa27.46■■□□□ 1.99
ACTL6A-213ENST00000491202 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
ACTL6A-213ENST00000491202 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
ACTL6A-213ENST00000491202 FBLN2P98095 1184 aa27.36■■□□□ 1.97
ACTL6A-213ENST00000491202 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
ACTL6A-213ENST00000491202 CHD1O14646 1710 aa27.27■■□□□ 1.96
ACTL6A-213ENST00000491202 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
ACTL6A-213ENST00000491202 GRIN2BQ13224 1484 aa27.24■■□□□ 1.95
ACTL6A-213ENST00000491202 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
ACTL6A-213ENST00000491202 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
ACTL6A-213ENST00000491202 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
ACTL6A-213ENST00000491202 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
ACTL6A-213ENST00000491202 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
ACTL6A-213ENST00000491202 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
ACTL6A-213ENST00000491202 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
ACTL6A-213ENST00000491202 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
ACTL6A-213ENST00000491202 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
ACTL6A-213ENST00000491202 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
ACTL6A-213ENST00000491202 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
ACTL6A-213ENST00000491202 BIVM-ERCC5R4GMW8 1640 aa27.07■■□□□ 1.92
ACTL6A-213ENST00000491202 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
ACTL6A-213ENST00000491202 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
ACTL6A-213ENST00000491202 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
ACTL6A-213ENST00000491202 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
ACTL6A-213ENST00000491202 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
ACTL6A-213ENST00000491202 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
ACTL6A-213ENST00000491202 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
ACTL6A-213ENST00000491202 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
ACTL6A-213ENST00000491202 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
ACTL6A-213ENST00000491202 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
ACTL6A-213ENST00000491202 NUP160Q12769 1436 aa26.76■■□□□ 1.87
ACTL6A-213ENST00000491202 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
ACTL6A-213ENST00000491202 TRHP20396 242 aaPredicted RBP26.7■■□□□ 1.86
ACTL6A-213ENST00000491202 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
ACTL6A-213ENST00000491202 IGF1RP08069 1367 aa26.58■■□□□ 1.85
ACTL6A-213ENST00000491202 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.85
ACTL6A-213ENST00000491202 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
ACTL6A-213ENST00000491202 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
ACTL6A-213ENST00000491202 PRG4Q92954 1404 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms