RNA–Protein interactions for RNA: ENST00000491153.1

KDM5B-208, Transcript of lysine demethylase 5B, humanhuman

TSL 2

Gene KDM5B, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-208ENST00000491153 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
KDM5B-208ENST00000491153 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
KDM5B-208ENST00000491153 ABCC9O60706 1549 aa16.83■□□□□ 0.28
KDM5B-208ENST00000491153 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
KDM5B-208ENST00000491153 NACADO15069 1562 aa16.16■□□□□ 0.18
KDM5B-208ENST00000491153 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
KDM5B-208ENST00000491153 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
KDM5B-208ENST00000491153 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
KDM5B-208ENST00000491153 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
KDM5B-208ENST00000491153 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
KDM5B-208ENST00000491153 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
KDM5B-208ENST00000491153 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
KDM5B-208ENST00000491153 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
KDM5B-208ENST00000491153 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
KDM5B-208ENST00000491153 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
KDM5B-208ENST00000491153 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
KDM5B-208ENST00000491153 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
KDM5B-208ENST00000491153 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
KDM5B-208ENST00000491153 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
KDM5B-208ENST00000491153 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
KDM5B-208ENST00000491153 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
KDM5B-208ENST00000491153 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
KDM5B-208ENST00000491153 SMARCA2P51531 1590 aa14.86□□□□□ -0.03
KDM5B-208ENST00000491153 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
KDM5B-208ENST00000491153 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
KDM5B-208ENST00000491153 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
KDM5B-208ENST00000491153 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
KDM5B-208ENST00000491153 RSF1Q96T23 1441 aaPredicted RBP14.59□□□□□ -0.07
KDM5B-208ENST00000491153 WIZO95785 1651 aa14.55□□□□□ -0.08
KDM5B-208ENST00000491153 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
KDM5B-208ENST00000491153 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
KDM5B-208ENST00000491153 NESP48681 1621 aa14.52□□□□□ -0.09
KDM5B-208ENST00000491153 CUX2O14529 1486 aa14.49□□□□□ -0.09
KDM5B-208ENST00000491153 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
KDM5B-208ENST00000491153 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
KDM5B-208ENST00000491153 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
KDM5B-208ENST00000491153 CFTRP13569 1480 aa14.37□□□□□ -0.11
KDM5B-208ENST00000491153 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
KDM5B-208ENST00000491153 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
KDM5B-208ENST00000491153 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
KDM5B-208ENST00000491153 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
KDM5B-208ENST00000491153 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
KDM5B-208ENST00000491153 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
KDM5B-208ENST00000491153 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
KDM5B-208ENST00000491153 WDR62O43379 1518 aa14.23□□□□□ -0.13
KDM5B-208ENST00000491153 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
KDM5B-208ENST00000491153 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
KDM5B-208ENST00000491153 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
KDM5B-208ENST00000491153 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
KDM5B-208ENST00000491153 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
KDM5B-208ENST00000491153 IFT140Q96RY7 1462 aa14□□□□□ -0.17
KDM5B-208ENST00000491153 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
KDM5B-208ENST00000491153 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
KDM5B-208ENST00000491153 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.19
KDM5B-208ENST00000491153 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
KDM5B-208ENST00000491153 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
KDM5B-208ENST00000491153 SOGA1O94964 1423 aa13.87□□□□□ -0.19
KDM5B-208ENST00000491153 CUX1P39880 1505 aa13.85□□□□□ -0.19
KDM5B-208ENST00000491153 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
KDM5B-208ENST00000491153 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.29e-6■□□□□ 10.2
KDM5B-208ENST00000491153 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
KDM5B-208ENST00000491153 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
KDM5B-208ENST00000491153 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
KDM5B-208ENST00000491153 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
KDM5B-208ENST00000491153 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
KDM5B-208ENST00000491153 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
KDM5B-208ENST00000491153 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
KDM5B-208ENST00000491153 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
KDM5B-208ENST00000491153 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
KDM5B-208ENST00000491153 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
KDM5B-208ENST00000491153 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
KDM5B-208ENST00000491153 FBLN2P98095 1184 aa13.67□□□□□ -0.22
KDM5B-208ENST00000491153 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
KDM5B-208ENST00000491153 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
KDM5B-208ENST00000491153 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
KDM5B-208ENST00000491153 SYNJ2O15056 1496 aa13.65□□□□□ -0.22
KDM5B-208ENST00000491153 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
KDM5B-208ENST00000491153 CHD1O14646 1710 aa13.61□□□□□ -0.23
KDM5B-208ENST00000491153 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
KDM5B-208ENST00000491153 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
KDM5B-208ENST00000491153 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
KDM5B-208ENST00000491153 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
KDM5B-208ENST00000491153 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
KDM5B-208ENST00000491153 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
KDM5B-208ENST00000491153 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
KDM5B-208ENST00000491153 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
KDM5B-208ENST00000491153 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
KDM5B-208ENST00000491153 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
KDM5B-208ENST00000491153 ADAMTS12P58397 1594 aa13.51□□□□□ -0.25
KDM5B-208ENST00000491153 NUP160Q12769 1436 aa13.49□□□□□ -0.25
KDM5B-208ENST00000491153 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
KDM5B-208ENST00000491153 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
KDM5B-208ENST00000491153 IGF1RP08069 1367 aa13.47□□□□□ -0.25
KDM5B-208ENST00000491153 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
KDM5B-208ENST00000491153 CEP170Q5SW79 1584 aa13.42□□□□□ -0.26
KDM5B-208ENST00000491153 JPH4Q96JJ6 628 aa13.38□□□□□ -0.27
KDM5B-208ENST00000491153 CUL7Q14999 1698 aa13.37□□□□□ -0.27
KDM5B-208ENST00000491153 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
KDM5B-208ENST00000491153 SHROOM2Q13796 1616 aa13.37□□□□□ -0.27
KDM5B-208ENST00000491153 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms