RNA–Protein interactions for RNA: ENST00000491066.1

PLXNA3-206, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 604 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-206ENST00000491066 NISCHQ9Y2I1 1504 aa47.21■■■■■ 5.15
PLXNA3-206ENST00000491066 ABCC9O60706 1549 aa42.92■■■■■ 4.46
PLXNA3-206ENST00000491066 CCDC180Q9P1Z9 1646 aa42.48■■■■■ 4.39
PLXNA3-206ENST00000491066 DNAJC5BQ9UF47 199 aa40.7■■■■■ 4.11
PLXNA3-206ENST00000491066 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
PLXNA3-206ENST00000491066 NACADO15069 1562 aa40.32■■■■■ 4.05
PLXNA3-206ENST00000491066 DCAF8L2P0C7V8 631 aa40.04■■■■■ 4
PLXNA3-206ENST00000491066 PABPN1Q86U42 306 aaKnown RBP eCLIP39.93■■■■□ 3.987e-7■□□□□ 10.4
PLXNA3-206ENST00000491066 MYO15BQ96JP2 1530 aa39.67■■■■□ 3.94
PLXNA3-206ENST00000491066 UNC13AQ9UPW8 1703 aa39.66■■■■□ 3.94
PLXNA3-206ENST00000491066 BICRAQ9NZM4 1560 aa39.5■■■■□ 3.91
PLXNA3-206ENST00000491066 ZCCHC6Q5VYS8 1495 aaKnown RBP39.01■■■■□ 3.84
PLXNA3-206ENST00000491066 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
PLXNA3-206ENST00000491066 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
PLXNA3-206ENST00000491066 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
PLXNA3-206ENST00000491066 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
PLXNA3-206ENST00000491066 SCRIBQ14160 1630 aa38.66■■■■□ 3.78
PLXNA3-206ENST00000491066 EIF4G1Q04637 1599 aaKnown RBP38.57■■■■□ 3.76
PLXNA3-206ENST00000491066 DNAJC5Q9H3Z4 198 aa37.71■■■■□ 3.63
PLXNA3-206ENST00000491066 NCAPD3P42695 1498 aa37.27■■■■□ 3.56
PLXNA3-206ENST00000491066 CUX2O14529 1486 aa37.2■■■■□ 3.54
PLXNA3-206ENST00000491066 ERCC6Q03468 1493 aa37.08■■■■□ 3.53
PLXNA3-206ENST00000491066 ATAD2BQ9ULI0 1458 aa37.07■■■■□ 3.53
PLXNA3-206ENST00000491066 SMARCA2P51531 1590 aa36.91■■■■□ 3.5
PLXNA3-206ENST00000491066 HMGXB3Q12766 1538 aa36.9■■■■□ 3.5
PLXNA3-206ENST00000491066 SMARCA4P51532 1647 aa36.87■■■■□ 3.49
PLXNA3-206ENST00000491066 NESP48681 1621 aa36.74■■■■□ 3.47
PLXNA3-206ENST00000491066 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
PLXNA3-206ENST00000491066 BAZ1BQ9UIG0 1483 aaKnown RBP36.66■■■■□ 3.46
PLXNA3-206ENST00000491066 PEG3Q9GZU2 1588 aa36.56■■■■□ 3.44
PLXNA3-206ENST00000491066 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
PLXNA3-206ENST00000491066 THOC2Q8NI27 1593 aaKnown RBP36.42■■■■□ 3.42
PLXNA3-206ENST00000491066 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
PLXNA3-206ENST00000491066 PDS5BQ9NTI5 1447 aa36.29■■■■□ 3.4
PLXNA3-206ENST00000491066 KIF21AQ7Z4S6 1674 aa36.19■■■■□ 3.38
PLXNA3-206ENST00000491066 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
PLXNA3-206ENST00000491066 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
PLXNA3-206ENST00000491066 WDR62O43379 1518 aa35.88■■■■□ 3.33
PLXNA3-206ENST00000491066 WIZO95785 1651 aa35.86■■■■□ 3.33
PLXNA3-206ENST00000491066 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
PLXNA3-206ENST00000491066 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
PLXNA3-206ENST00000491066 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
PLXNA3-206ENST00000491066 CFTRP13569 1480 aa35.6■■■■□ 3.29
PLXNA3-206ENST00000491066 OSCARQ8IYS5 282 aa35.49■■■■□ 3.27
PLXNA3-206ENST00000491066 RSF1Q96T23 1441 aaPredicted RBP35.49■■■■□ 3.27
PLXNA3-206ENST00000491066 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
PLXNA3-206ENST00000491066 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
PLXNA3-206ENST00000491066 PRDM2Q13029 1718 aa35.07■■■■□ 3.2
PLXNA3-206ENST00000491066 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
PLXNA3-206ENST00000491066 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
PLXNA3-206ENST00000491066 ZNF608Q9ULD9 1512 aaPredicted RBP35.02■■■■□ 3.2
PLXNA3-206ENST00000491066 RIMBP3CA6NJZ7 1639 aa34.95■■■■□ 3.19
PLXNA3-206ENST00000491066 RIMBP3BA6NNM3 1639 aa34.95■■■■□ 3.19
PLXNA3-206ENST00000491066 RIMBP3Q9UFD9 1639 aa34.95■■■■□ 3.19
PLXNA3-206ENST00000491066 TOPBP1Q92547 1522 aa34.94■■■■□ 3.18
PLXNA3-206ENST00000491066 ABCC8Q09428 1581 aa34.88■■■■□ 3.17
PLXNA3-206ENST00000491066 ARHGEF11O15085 1522 aa34.83■■■■□ 3.17
PLXNA3-206ENST00000491066 DNMBPQ6XZF7 1577 aa34.75■■■■□ 3.15
PLXNA3-206ENST00000491066 EIF4G3O43432 1585 aaKnown RBP34.74■■■■□ 3.15
PLXNA3-206ENST00000491066 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.14
PLXNA3-206ENST00000491066 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
PLXNA3-206ENST00000491066 TARBP1Q13395 1621 aaKnown RBP34.64■■■■□ 3.14
PLXNA3-206ENST00000491066 POLA1P09884 1462 aaPredicted RBP34.55■■■■□ 3.12
PLXNA3-206ENST00000491066 CHD1O14646 1710 aa34.54■■■■□ 3.12
PLXNA3-206ENST00000491066 FBLN2P98095 1184 aa34.53■■■■□ 3.12
PLXNA3-206ENST00000491066 ARAP1Q96P48 1450 aa34.46■■■■□ 3.11
PLXNA3-206ENST00000491066 SOGA1O94964 1423 aa34.43■■■■□ 3.1
PLXNA3-206ENST00000491066 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
PLXNA3-206ENST00000491066 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
PLXNA3-206ENST00000491066 TRHP20396 242 aaPredicted RBP34.38■■■■□ 3.09
PLXNA3-206ENST00000491066 WDR97A6NE52 1622 aa34.28■■■■□ 3.08
PLXNA3-206ENST00000491066 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
PLXNA3-206ENST00000491066 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
PLXNA3-206ENST00000491066 CHMP7Q8WUX9 453 aaPredicted RBP34.24■■■■□ 3.07
PLXNA3-206ENST00000491066 CLASP1Q7Z460 1538 aa34.2■■■■□ 3.07
PLXNA3-206ENST00000491066 MAGI1Q96QZ7 1491 aaPredicted RBP34.2■■■■□ 3.06
PLXNA3-206ENST00000491066 CUX1P39880 1505 aa34.17■■■■□ 3.06
PLXNA3-206ENST00000491066 GRIN2BQ13224 1484 aa34.15■■■■□ 3.06
PLXNA3-206ENST00000491066 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
PLXNA3-206ENST00000491066 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
PLXNA3-206ENST00000491066 GAPVD1Q14C86 1478 aa33.98■■■■□ 3.03
PLXNA3-206ENST00000491066 PBRM1Q86U86 1689 aa33.89■■■■□ 3.02
PLXNA3-206ENST00000491066 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
PLXNA3-206ENST00000491066 ABCA5Q8WWZ7 1642 aa33.82■■■■□ 3
PLXNA3-206ENST00000491066 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
PLXNA3-206ENST00000491066 AEBP2Q6ZN18 517 aaPredicted RBP33.69■■■□□ 2.98
PLXNA3-206ENST00000491066 WRNQ14191 1432 aaPredicted RBP eCLIP33.69■■■□□ 2.98
PLXNA3-206ENST00000491066 NUP160Q12769 1436 aa33.62■■■□□ 2.97
PLXNA3-206ENST00000491066 ERCC6L2Q5T890 1561 aa33.62■■■□□ 2.97
PLXNA3-206ENST00000491066 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
PLXNA3-206ENST00000491066 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
PLXNA3-206ENST00000491066 CEP170Q5SW79 1584 aa33.56■■■□□ 2.96
PLXNA3-206ENST00000491066 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
PLXNA3-206ENST00000491066 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
PLXNA3-206ENST00000491066 BIVM-ERCC5R4GMW8 1640 aa33.49■■■□□ 2.95
PLXNA3-206ENST00000491066 SHROOM2Q13796 1616 aa33.48■■■□□ 2.95
PLXNA3-206ENST00000491066 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
PLXNA3-206ENST00000491066 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
PLXNA3-206ENST00000491066 PRG4Q92954 1404 aaPredicted RBP33.33■■■□□ 2.93
PLXNA3-206ENST00000491066 KIF13AQ9H1H9 1805 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms