RNA–Protein interactions for RNA: ENST00000490843.6

DEDD-210, Transcript of death effector domain containing, human

APPRIS P1 TSL 5 BASIC

Gene DEDD, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEDD-210	ENST00000490843	NISCH	Q9Y2I1	1504 aa		26.13	■■□□□ 1.77
DEDD-210	ENST00000490843	CCDC180	Q9P1Z9	1646 aa		22.88	■■□□□ 1.25
DEDD-210	ENST00000490843	ZCCHC6	Q5VYS8	1495 aa	Known RBP	21.93	■■□□□ 1.1
DEDD-210	ENST00000490843	ABCC9	O60706	1549 aa		21.7	■■□□□ 1.07
DEDD-210	ENST00000490843	DCAF1	Q9Y4B6	1507 aa		21.66	■■□□□ 1.06
DEDD-210	ENST00000490843	DCAF8L2	P0C7V8	631 aa		21.58	■■□□□ 1.04
DEDD-210	ENST00000490843	MYO15B	Q96JP2	1530 aa		21.49	■■□□□ 1.03
DEDD-210	ENST00000490843	NACAD	O15069	1562 aa		21.37	■■□□□ 1.01
DEDD-210	ENST00000490843	RB1CC1	Q8TDY2	1594 aa		21.21	■□□□□ 0.99
DEDD-210	ENST00000490843	SHROOM4	Q9ULL8	1493 aa		21.12	■□□□□ 0.97
DEDD-210	ENST00000490843	SCRIB	Q14160	1630 aa		20.95	■□□□□ 0.94
DEDD-210	ENST00000490843	UNC13A	Q9UPW8	1703 aa		20.63	■□□□□ 0.89
DEDD-210	ENST00000490843	BICRA	Q9NZM4	1560 aa		20.49	■□□□□ 0.87
DEDD-210	ENST00000490843	PABPN1	Q86U42	306 aa	Known RBP eCLIP	20.42	■□□□□ 0.86
DEDD-210	ENST00000490843	SUPT5H	O00267	1087 aa	Known RBP	20.27	■□□□□ 0.84
DEDD-210	ENST00000490843	CECR2	Q9BXF3	1484 aa		20.26	■□□□□ 0.83
DEDD-210	ENST00000490843	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	20.22	■□□□□ 0.83
DEDD-210	ENST00000490843	RSF1	Q96T23	1441 aa	Predicted RBP	20.2	■□□□□ 0.82
DEDD-210	ENST00000490843	MROH2B	Q7Z745	1585 aa		20.14	■□□□□ 0.81
DEDD-210	ENST00000490843	SMARCA4	P51532	1647 aa		20.11	■□□□□ 0.81
DEDD-210	ENST00000490843	WIZ	O95785	1651 aa		19.94	■□□□□ 0.78
DEDD-210	ENST00000490843	EIF4G1	Q04637	1599 aa	Known RBP	19.93	■□□□□ 0.78
DEDD-210	ENST00000490843	PEG3	Q9GZU2	1588 aa		19.9	■□□□□ 0.78
DEDD-210	ENST00000490843	SMARCA2	P51531	1590 aa		19.85	■□□□□ 0.77
DEDD-210	ENST00000490843	ATAD2B	Q9ULI0	1458 aa		19.82	■□□□□ 0.76
DEDD-210	ENST00000490843	TOP2A	P11388	1531 aa	Known RBP	19.81	■□□□□ 0.76
DEDD-210	ENST00000490843	BAZ1B	Q9UIG0	1483 aa	Known RBP	19.72	■□□□□ 0.75
DEDD-210	ENST00000490843	NCAPD3	P42695	1498 aa		19.71	■□□□□ 0.75
DEDD-210	ENST00000490843	HMGXB3	Q12766	1538 aa		19.68	■□□□□ 0.74
DEDD-210	ENST00000490843	CC2D2A	Q9P2K1	1620 aa		19.65	■□□□□ 0.74
DEDD-210	ENST00000490843	CCDC88B	A6NC98	1476 aa		19.56	■□□□□ 0.72
DEDD-210	ENST00000490843	CHIC1	Q5VXU3	224 aa		19.35	■□□□□ 0.69
DEDD-210	ENST00000490843	CFTR	P13569	1480 aa		19.22	■□□□□ 0.67
DEDD-210	ENST00000490843	DNAJC5B	Q9UF47	199 aa		19.2	■□□□□ 0.66
DEDD-210	ENST00000490843	CADPS	Q9ULU8	1353 aa		19.19	■□□□□ 0.66
DEDD-210	ENST00000490843	HRC	P23327	699 aa		19.15	■□□□□ 0.66
DEDD-210	ENST00000490843	TRIM41	Q8WV44	630 aa		19.14	■□□□□ 0.65
DEDD-210	ENST00000490843	ABCC8	Q09428	1581 aa		19.07	■□□□□ 0.64
DEDD-210	ENST00000490843	LAMC3	Q9Y6N6	1575 aa		19.07	■□□□□ 0.64
DEDD-210	ENST00000490843	PRDM2	Q13029	1718 aa		19.06	■□□□□ 0.64
DEDD-210	ENST00000490843	WRN	Q14191	1432 aa	Predicted RBP eCLIP	19.05	■□□□□ 0.64
DEDD-210	ENST00000490843	NES	P48681	1621 aa		18.98	■□□□□ 0.63
DEDD-210	ENST00000490843	FANCD2	Q9BXW9	1451 aa		18.96	■□□□□ 0.63
DEDD-210	ENST00000490843	PDS5B	Q9NTI5	1447 aa		18.95	■□□□□ 0.62
DEDD-210	ENST00000490843	SYNJ1	O43426	1573 aa		18.91	■□□□□ 0.62
DEDD-210	ENST00000490843	TOP2B	Q02880	1626 aa		18.89	■□□□□ 0.61
DEDD-210	ENST00000490843	CEP164	Q9UPV0	1460 aa		18.88	■□□□□ 0.61
DEDD-210	ENST00000490843	BIVM-ERCC5	R4GMW8	1640 aa		18.87	■□□□□ 0.61
DEDD-210	ENST00000490843	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.85	■□□□□ 0.61
DEDD-210	ENST00000490843	CUX1	P39880	1505 aa		18.85	■□□□□ 0.61
DEDD-210	ENST00000490843	DNMBP	Q6XZF7	1577 aa		18.77	■□□□□ 0.6
DEDD-210	ENST00000490843	EEA1	Q15075	1411 aa		18.76	■□□□□ 0.59
DEDD-210	ENST00000490843	KIF21A	Q7Z4S6	1674 aa		18.74	■□□□□ 0.59
DEDD-210	ENST00000490843	TOPBP1	Q92547	1522 aa		18.73	■□□□□ 0.59
DEDD-210	ENST00000490843	FAM9A	Q8IZU1	332 aa	Predicted RBP	18.7	■□□□□ 0.58
DEDD-210	ENST00000490843	URB2	Q14146	1524 aa	Known RBP	18.7	■□□□□ 0.58
DEDD-210	ENST00000490843	SOGA1	O94964	1423 aa		18.69	■□□□□ 0.58
DEDD-210	ENST00000490843	ERCC6	Q03468	1493 aa		18.69	■□□□□ 0.58
DEDD-210	ENST00000490843	FGD5	Q6ZNL6	1462 aa		18.69	■□□□□ 0.58
DEDD-210	ENST00000490843	MRC2	Q9UBG0	1479 aa		18.68	■□□□□ 0.58
DEDD-210	ENST00000490843	PCGF6	Q9BYE7	350 aa		18.64	■□□□□ 0.58
DEDD-210	ENST00000490843	POLA1	P09884	1462 aa	Predicted RBP	18.62	■□□□□ 0.57
DEDD-210	ENST00000490843	KIF27	Q86VH2	1401 aa		18.6	■□□□□ 0.57
DEDD-210	ENST00000490843	CSRNP3	Q8WYN3	585 aa		18.6	■□□□□ 0.57
DEDD-210	ENST00000490843	RUSC2	Q8N2Y8	1516 aa		18.59	■□□□□ 0.57
DEDD-210	ENST00000490843	WDR62	O43379	1518 aa		18.58	■□□□□ 0.56
DEDD-210	ENST00000490843	CUX2	O14529	1486 aa		18.55	■□□□□ 0.56
DEDD-210	ENST00000490843	ABCA10	Q8WWZ4	1543 aa		18.55	■□□□□ 0.56
DEDD-210	ENST00000490843	PELP1	Q8IZL8	1130 aa	Known RBP	18.54	■□□□□ 0.56
DEDD-210	ENST00000490843	LOC105371045	A0A1W2PR82	267 aa		18.54	■□□□□ 0.56
DEDD-210	ENST00000490843	RAD54L2	Q9Y4B4	1467 aa		18.52	■□□□□ 0.56
DEDD-210	ENST00000490843	THOC2	Q8NI27	1593 aa	Known RBP	18.52	■□□□□ 0.55
DEDD-210	ENST00000490843	ZEB1	P37275	1124 aa	Predicted RBP	18.49	■□□□□ 0.55
DEDD-210	ENST00000490843	KIF21B	O75037	1637 aa		18.45	■□□□□ 0.54
DEDD-210	ENST00000490843	WDR97	A6NE52	1622 aa		18.45	■□□□□ 0.54
DEDD-210	ENST00000490843	TRIM26	Q12899	539 aa	Predicted RBP	18.44	■□□□□ 0.54
DEDD-210	ENST00000490843	GOLGA3	Q08378	1498 aa		18.44	■□□□□ 0.54
DEDD-210	ENST00000490843	IFT140	Q96RY7	1462 aa		18.44	■□□□□ 0.54
DEDD-210	ENST00000490843	TARBP1	Q13395	1621 aa	Known RBP	18.44	■□□□□ 0.54
DEDD-210	ENST00000490843	PRX	Q9BXM0	1461 aa		18.41	■□□□□ 0.54
DEDD-210	ENST00000490843	IGF1R	P08069	1367 aa		18.4	■□□□□ 0.54
DEDD-210	ENST00000490843	EHMT2	Q96KQ7	1210 aa		18.39	■□□□□ 0.54
DEDD-210	ENST00000490843	ERICH3	Q5RHP9	1530 aa		18.39	■□□□□ 0.53
DEDD-210	ENST00000490843	ABCA5	Q8WWZ7	1642 aa		18.38	■□□□□ 0.53
DEDD-210	ENST00000490843	TDRD9	Q8NDG6	1382 aa	Known RBP	18.37	■□□□□ 0.53
DEDD-210	ENST00000490843	GAPVD1	Q14C86	1478 aa		18.37	■□□□□ 0.53
DEDD-210	ENST00000490843	TNIK	Q9UKE5	1360 aa		18.35	■□□□□ 0.53
DEDD-210	ENST00000490843	UBTF	P17480	764 aa	Known RBP	18.34	■□□□□ 0.53
DEDD-210	ENST00000490843	RAPGEF2	Q9Y4G8	1499 aa		18.34	■□□□□ 0.53
DEDD-210	ENST00000490843	CARMIL1	Q5VZK9	1371 aa		18.33	■□□□□ 0.52
DEDD-210	ENST00000490843	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.31	■□□□□ 0.52
DEDD-210	ENST00000490843	CUL7	Q14999	1698 aa		18.31	■□□□□ 0.52
DEDD-210	ENST00000490843	AQR	O60306	1485 aa	Known RBP eCLIP	18.28	■□□□□ 0.52	5e-7	■■■■■ 27.4
DEDD-210	ENST00000490843	GRIN2B	Q13224	1484 aa		18.28	■□□□□ 0.52
DEDD-210	ENST00000490843	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.27	■□□□□ 0.51
DEDD-210	ENST00000490843	EIF4G3	O43432	1585 aa	Known RBP	18.23	■□□□□ 0.51
DEDD-210	ENST00000490843	PBRM1	Q86U86	1689 aa		18.23	■□□□□ 0.51
DEDD-210	ENST00000490843	CEP162	Q5TB80	1403 aa		18.22	■□□□□ 0.51
DEDD-210	ENST00000490843	FHAD1	B1AJZ9	1412 aa		18.2	■□□□□ 0.5
DEDD-210	ENST00000490843	ADAMTS12	P58397	1594 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms