RNA–Protein interactions for RNA: ENST00000490815.1

RRP12-209, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-209ENST00000490815 NISCHQ9Y2I1 1504 aa39.32■■■■□ 3.89
RRP12-209ENST00000490815 CCDC180Q9P1Z9 1646 aa35.38■■■■□ 3.25
RRP12-209ENST00000490815 ABCC9O60706 1549 aa35.14■■■■□ 3.22
RRP12-209ENST00000490815 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
RRP12-209ENST00000490815 NACADO15069 1562 aa33.38■■■□□ 2.93
RRP12-209ENST00000490815 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.87
RRP12-209ENST00000490815 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
RRP12-209ENST00000490815 DCAF8L2P0C7V8 631 aa32.88■■■□□ 2.85
RRP12-209ENST00000490815 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
RRP12-209ENST00000490815 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
RRP12-209ENST00000490815 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.81
RRP12-209ENST00000490815 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
RRP12-209ENST00000490815 DCAF1Q9Y4B6 1507 aa32.57■■■□□ 2.8
RRP12-209ENST00000490815 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
RRP12-209ENST00000490815 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
RRP12-209ENST00000490815 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
RRP12-209ENST00000490815 EIF4G1Q04637 1599 aaKnown RBP31.79■■■□□ 2.68
RRP12-209ENST00000490815 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
RRP12-209ENST00000490815 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
RRP12-209ENST00000490815 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
RRP12-209ENST00000490815 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
RRP12-209ENST00000490815 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
RRP12-209ENST00000490815 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
RRP12-209ENST00000490815 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
RRP12-209ENST00000490815 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
RRP12-209ENST00000490815 CUX2O14529 1486 aa30.38■■■□□ 2.45
RRP12-209ENST00000490815 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
RRP12-209ENST00000490815 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
RRP12-209ENST00000490815 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
RRP12-209ENST00000490815 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
RRP12-209ENST00000490815 NESP48681 1621 aa30.22■■■□□ 2.43
RRP12-209ENST00000490815 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
RRP12-209ENST00000490815 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
RRP12-209ENST00000490815 WIZO95785 1651 aa29.91■■■□□ 2.38
RRP12-209ENST00000490815 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
RRP12-209ENST00000490815 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
RRP12-209ENST00000490815 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
RRP12-209ENST00000490815 RSF1Q96T23 1441 aaPredicted RBP29.64■■■□□ 2.34
RRP12-209ENST00000490815 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
RRP12-209ENST00000490815 WDR62O43379 1518 aa29.61■■■□□ 2.33
RRP12-209ENST00000490815 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
RRP12-209ENST00000490815 CFTRP13569 1480 aa29.52■■■□□ 2.32
RRP12-209ENST00000490815 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
RRP12-209ENST00000490815 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
RRP12-209ENST00000490815 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
RRP12-209ENST00000490815 URB2Q14146 1524 aaKnown RBP29.25■■■□□ 2.27
RRP12-209ENST00000490815 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
RRP12-209ENST00000490815 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
RRP12-209ENST00000490815 IFT140Q96RY7 1462 aa28.93■■■□□ 2.22
RRP12-209ENST00000490815 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
RRP12-209ENST00000490815 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
RRP12-209ENST00000490815 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
RRP12-209ENST00000490815 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
RRP12-209ENST00000490815 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
RRP12-209ENST00000490815 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
RRP12-209ENST00000490815 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
RRP12-209ENST00000490815 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
RRP12-209ENST00000490815 RIMBP3CA6NJZ7 1639 aa28.6■■■□□ 2.17
RRP12-209ENST00000490815 RIMBP3BA6NNM3 1639 aa28.6■■■□□ 2.17
RRP12-209ENST00000490815 RIMBP3Q9UFD9 1639 aa28.6■■■□□ 2.17
RRP12-209ENST00000490815 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
RRP12-209ENST00000490815 CHD1O14646 1710 aa28.54■■■□□ 2.16
RRP12-209ENST00000490815 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
RRP12-209ENST00000490815 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
RRP12-209ENST00000490815 RAD54L2Q9Y4B4 1467 aa28.47■■■□□ 2.15
RRP12-209ENST00000490815 SOGA1O94964 1423 aa28.45■■■□□ 2.15
RRP12-209ENST00000490815 CUX1P39880 1505 aa28.45■■■□□ 2.15
RRP12-209ENST00000490815 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
RRP12-209ENST00000490815 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
RRP12-209ENST00000490815 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
RRP12-209ENST00000490815 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
RRP12-209ENST00000490815 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
RRP12-209ENST00000490815 FBLN2P98095 1184 aa28.24■■■□□ 2.11
RRP12-209ENST00000490815 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
RRP12-209ENST00000490815 ARAP1Q96P48 1450 aa28.22■■■□□ 2.11
RRP12-209ENST00000490815 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
RRP12-209ENST00000490815 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
RRP12-209ENST00000490815 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
RRP12-209ENST00000490815 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
RRP12-209ENST00000490815 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
RRP12-209ENST00000490815 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
RRP12-209ENST00000490815 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
RRP12-209ENST00000490815 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
RRP12-209ENST00000490815 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
RRP12-209ENST00000490815 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
RRP12-209ENST00000490815 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
RRP12-209ENST00000490815 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
RRP12-209ENST00000490815 ADAMTS12P58397 1594 aa27.93■■■□□ 2.06
RRP12-209ENST00000490815 GRIN2AQ12879 1464 aa27.9■■■□□ 2.06
RRP12-209ENST00000490815 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
RRP12-209ENST00000490815 NUP160Q12769 1436 aa27.84■■■□□ 2.05
RRP12-209ENST00000490815 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
RRP12-209ENST00000490815 FHAD1B1AJZ9 1412 aa27.8■■■□□ 2.04
RRP12-209ENST00000490815 TRHP20396 242 aaPredicted RBP27.77■■■□□ 2.04
RRP12-209ENST00000490815 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
RRP12-209ENST00000490815 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
RRP12-209ENST00000490815 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
RRP12-209ENST00000490815 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
RRP12-209ENST00000490815 CUL7Q14999 1698 aa27.46■■□□□ 1.99
RRP12-209ENST00000490815 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms