RNA–Protein interactions for RNA: ENST00000490717.5

TSN-209, Transcript of translin, humanhuman

TSL 4

Gene TSN, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-209ENST00000490717 NISCHQ9Y2I1 1504 aa40.38■■■■■ 4.06
TSN-209ENST00000490717 ABCC9O60706 1549 aa36.93■■■■□ 3.5
TSN-209ENST00000490717 CCDC180Q9P1Z9 1646 aa36.37■■■■□ 3.41
TSN-209ENST00000490717 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
TSN-209ENST00000490717 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
TSN-209ENST00000490717 NACADO15069 1562 aa34.48■■■■□ 3.11
TSN-209ENST00000490717 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
TSN-209ENST00000490717 DCAF8L2P0C7V8 631 aa34.26■■■■□ 3.08
TSN-209ENST00000490717 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
TSN-209ENST00000490717 BICRAQ9NZM4 1560 aa34.01■■■■□ 3.03
TSN-209ENST00000490717 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
TSN-209ENST00000490717 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
TSN-209ENST00000490717 CC2D2AQ9P2K1 1620 aa33.33■■■□□ 2.93
TSN-209ENST00000490717 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.92
TSN-209ENST00000490717 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
TSN-209ENST00000490717 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
TSN-209ENST00000490717 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
TSN-209ENST00000490717 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
TSN-209ENST00000490717 DNAJC5Q9H3Z4 198 aa32.48■■■□□ 2.79
TSN-209ENST00000490717 CUX2O14529 1486 aa31.89■■■□□ 2.7
TSN-209ENST00000490717 NCAPD3P42695 1498 aa31.87■■■□□ 2.69
TSN-209ENST00000490717 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
TSN-209ENST00000490717 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
TSN-209ENST00000490717 NESP48681 1621 aa31.66■■■□□ 2.66
TSN-209ENST00000490717 SMARCA4P51532 1647 aa31.61■■■□□ 2.65
TSN-209ENST00000490717 HMGXB3Q12766 1538 aa31.57■■■□□ 2.64
TSN-209ENST00000490717 SMARCA2P51531 1590 aa31.55■■■□□ 2.64
TSN-209ENST00000490717 THOC2Q8NI27 1593 aaKnown RBP31.38■■■□□ 2.61
TSN-209ENST00000490717 BAZ1BQ9UIG0 1483 aaKnown RBP31.36■■■□□ 2.61
TSN-209ENST00000490717 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
TSN-209ENST00000490717 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
TSN-209ENST00000490717 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
TSN-209ENST00000490717 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
TSN-209ENST00000490717 MROH2BQ7Z745 1585 aa31.18■■■□□ 2.58
TSN-209ENST00000490717 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
TSN-209ENST00000490717 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
TSN-209ENST00000490717 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
TSN-209ENST00000490717 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.53
TSN-209ENST00000490717 WIZO95785 1651 aa30.81■■■□□ 2.52
TSN-209ENST00000490717 WDR62O43379 1518 aa30.79■■■□□ 2.52
TSN-209ENST00000490717 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
TSN-209ENST00000490717 FANCD2Q9BXW9 1451 aa30.55■■■□□ 2.48
TSN-209ENST00000490717 CFTRP13569 1480 aa30.45■■■□□ 2.47
TSN-209ENST00000490717 URB2Q14146 1524 aaKnown RBP30.4■■■□□ 2.46
TSN-209ENST00000490717 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
TSN-209ENST00000490717 RSF1Q96T23 1441 aaPredicted RBP30.33■■■□□ 2.45
TSN-209ENST00000490717 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
TSN-209ENST00000490717 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.42
TSN-209ENST00000490717 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.42
TSN-209ENST00000490717 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.42
TSN-209ENST00000490717 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
TSN-209ENST00000490717 PRDM2Q13029 1718 aa30.12■■■□□ 2.41
TSN-209ENST00000490717 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
TSN-209ENST00000490717 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
TSN-209ENST00000490717 ARHGEF11O15085 1522 aa29.96■■■□□ 2.39
TSN-209ENST00000490717 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
TSN-209ENST00000490717 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
TSN-209ENST00000490717 CHD1O14646 1710 aa29.79■■■□□ 2.36
TSN-209ENST00000490717 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.352e-8■■■□□ 19
TSN-209ENST00000490717 CYB5RLQ6IPT4 315 aa29.76■■■□□ 2.35
TSN-209ENST00000490717 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
TSN-209ENST00000490717 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
TSN-209ENST00000490717 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
TSN-209ENST00000490717 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
TSN-209ENST00000490717 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
TSN-209ENST00000490717 RAD54L2Q9Y4B4 1467 aa29.57■■■□□ 2.32
TSN-209ENST00000490717 FBLN2P98095 1184 aa29.57■■■□□ 2.32
TSN-209ENST00000490717 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
TSN-209ENST00000490717 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
TSN-209ENST00000490717 SOGA1O94964 1423 aa29.43■■■□□ 2.3
TSN-209ENST00000490717 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
TSN-209ENST00000490717 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
TSN-209ENST00000490717 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
TSN-209ENST00000490717 CUX1P39880 1505 aa29.31■■■□□ 2.28
TSN-209ENST00000490717 WDR97A6NE52 1622 aa29.24■■■□□ 2.27
TSN-209ENST00000490717 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
TSN-209ENST00000490717 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
TSN-209ENST00000490717 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
TSN-209ENST00000490717 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
TSN-209ENST00000490717 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
TSN-209ENST00000490717 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
TSN-209ENST00000490717 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
TSN-209ENST00000490717 ERCC6L2Q5T890 1561 aa29.02■■■□□ 2.24
TSN-209ENST00000490717 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
TSN-209ENST00000490717 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
TSN-209ENST00000490717 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
TSN-209ENST00000490717 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
TSN-209ENST00000490717 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
TSN-209ENST00000490717 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
TSN-209ENST00000490717 NUP160Q12769 1436 aa28.79■■■□□ 2.2
TSN-209ENST00000490717 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
TSN-209ENST00000490717 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
TSN-209ENST00000490717 KIF13AQ9H1H9 1805 aa28.67■■■□□ 2.18
TSN-209ENST00000490717 BIVM-ERCC5R4GMW8 1640 aa28.67■■■□□ 2.18
TSN-209ENST00000490717 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
TSN-209ENST00000490717 TOP2BQ02880 1626 aa28.65■■■□□ 2.18
TSN-209ENST00000490717 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
TSN-209ENST00000490717 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
TSN-209ENST00000490717 PRG4Q92954 1404 aaPredicted RBP28.54■■■□□ 2.16
TSN-209ENST00000490717 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms