RNA–Protein interactions for RNA: ENST00000490705.1

ARF1-211, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-211ENST00000490705 NISCHQ9Y2I1 1504 aa32.68■■■□□ 2.82
ARF1-211ENST00000490705 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
ARF1-211ENST00000490705 ABCC9O60706 1549 aa28.61■■■□□ 2.17
ARF1-211ENST00000490705 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
ARF1-211ENST00000490705 NACADO15069 1562 aa27.39■■□□□ 1.98
ARF1-211ENST00000490705 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
ARF1-211ENST00000490705 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
ARF1-211ENST00000490705 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
ARF1-211ENST00000490705 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
ARF1-211ENST00000490705 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
ARF1-211ENST00000490705 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
ARF1-211ENST00000490705 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
ARF1-211ENST00000490705 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
ARF1-211ENST00000490705 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
ARF1-211ENST00000490705 DNAJC5BQ9UF47 199 aa26.3■■□□□ 1.8
ARF1-211ENST00000490705 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
ARF1-211ENST00000490705 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
ARF1-211ENST00000490705 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
ARF1-211ENST00000490705 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
ARF1-211ENST00000490705 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
ARF1-211ENST00000490705 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
ARF1-211ENST00000490705 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
ARF1-211ENST00000490705 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
ARF1-211ENST00000490705 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
ARF1-211ENST00000490705 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
ARF1-211ENST00000490705 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
ARF1-211ENST00000490705 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
ARF1-211ENST00000490705 WIZO95785 1651 aa24.94■■□□□ 1.58
ARF1-211ENST00000490705 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
ARF1-211ENST00000490705 NESP48681 1621 aa24.72■■□□□ 1.55
ARF1-211ENST00000490705 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
ARF1-211ENST00000490705 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
ARF1-211ENST00000490705 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
ARF1-211ENST00000490705 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
ARF1-211ENST00000490705 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
ARF1-211ENST00000490705 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
ARF1-211ENST00000490705 CUX2O14529 1486 aa24.44■■□□□ 1.5
ARF1-211ENST00000490705 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
ARF1-211ENST00000490705 CFTRP13569 1480 aa24.36■■□□□ 1.49
ARF1-211ENST00000490705 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
ARF1-211ENST00000490705 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
ARF1-211ENST00000490705 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
ARF1-211ENST00000490705 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
ARF1-211ENST00000490705 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
ARF1-211ENST00000490705 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
ARF1-211ENST00000490705 WDR62O43379 1518 aa24.16■■□□□ 1.46
ARF1-211ENST00000490705 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
ARF1-211ENST00000490705 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
ARF1-211ENST00000490705 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
ARF1-211ENST00000490705 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
ARF1-211ENST00000490705 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
ARF1-211ENST00000490705 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
ARF1-211ENST00000490705 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
ARF1-211ENST00000490705 CUX1P39880 1505 aa23.64■■□□□ 1.38
ARF1-211ENST00000490705 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
ARF1-211ENST00000490705 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
ARF1-211ENST00000490705 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
ARF1-211ENST00000490705 EIF4G3O43432 1585 aaKnown RBP23.58■■□□□ 1.37
ARF1-211ENST00000490705 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
ARF1-211ENST00000490705 SOGA1O94964 1423 aa23.54■■□□□ 1.36
ARF1-211ENST00000490705 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.351e-6■■■□□ 17.9
ARF1-211ENST00000490705 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
ARF1-211ENST00000490705 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
ARF1-211ENST00000490705 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
ARF1-211ENST00000490705 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
ARF1-211ENST00000490705 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
ARF1-211ENST00000490705 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
ARF1-211ENST00000490705 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
ARF1-211ENST00000490705 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
ARF1-211ENST00000490705 CHD1O14646 1710 aa23.31■■□□□ 1.32
ARF1-211ENST00000490705 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
ARF1-211ENST00000490705 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
ARF1-211ENST00000490705 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
ARF1-211ENST00000490705 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
ARF1-211ENST00000490705 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
ARF1-211ENST00000490705 FBLN2P98095 1184 aa23.25■■□□□ 1.31
ARF1-211ENST00000490705 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
ARF1-211ENST00000490705 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
ARF1-211ENST00000490705 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
ARF1-211ENST00000490705 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
ARF1-211ENST00000490705 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
ARF1-211ENST00000490705 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
ARF1-211ENST00000490705 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
ARF1-211ENST00000490705 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
ARF1-211ENST00000490705 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
ARF1-211ENST00000490705 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
ARF1-211ENST00000490705 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
ARF1-211ENST00000490705 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
ARF1-211ENST00000490705 GRIN2AQ12879 1464 aa23■■□□□ 1.27
ARF1-211ENST00000490705 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
ARF1-211ENST00000490705 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
ARF1-211ENST00000490705 NUP160Q12769 1436 aa22.89■■□□□ 1.25
ARF1-211ENST00000490705 CUL7Q14999 1698 aa22.87■■□□□ 1.25
ARF1-211ENST00000490705 IGF1RP08069 1367 aa22.86■■□□□ 1.25
ARF1-211ENST00000490705 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
ARF1-211ENST00000490705 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
ARF1-211ENST00000490705 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
ARF1-211ENST00000490705 RUSC2Q8N2Y8 1516 aa22.74■■□□□ 1.23
ARF1-211ENST00000490705 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
ARF1-211ENST00000490705 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms