RNA–Protein interactions for RNA: ENST00000490513.1

XPO4-204, Transcript of exportin 4, humanhuman

TSL 4

Gene XPO4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO4-204ENST00000490513 NISCHQ9Y2I1 1504 aa50.28■■■■■ 5.64
XPO4-204ENST00000490513 CCDC180Q9P1Z9 1646 aa45.18■■■■■ 4.82
XPO4-204ENST00000490513 ABCC9O60706 1549 aa45.01■■■■■ 4.8
XPO4-204ENST00000490513 RB1CC1Q8TDY2 1594 aa42.94■■■■■ 4.46
XPO4-204ENST00000490513 NACADO15069 1562 aa42.65■■■■■ 4.42
XPO4-204ENST00000490513 DCAF8L2P0C7V8 631 aa42.31■■■■■ 4.36
XPO4-204ENST00000490513 MYO15BQ96JP2 1530 aa42.1■■■■■ 4.33
XPO4-204ENST00000490513 DNAJC5BQ9UF47 199 aa42.09■■■■■ 4.33
XPO4-204ENST00000490513 UNC13AQ9UPW8 1703 aa41.98■■■■■ 4.31
XPO4-204ENST00000490513 PABPN1Q86U42 306 aaKnown RBP eCLIP41.86■■■■■ 4.29
XPO4-204ENST00000490513 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
XPO4-204ENST00000490513 BICRAQ9NZM4 1560 aa41.65■■■■■ 4.26
XPO4-204ENST00000490513 DCAF1Q9Y4B6 1507 aa41.58■■■■■ 4.25
XPO4-204ENST00000490513 SHROOM4Q9ULL8 1493 aa41.17■■■■■ 4.18
XPO4-204ENST00000490513 SCRIBQ14160 1630 aa41.11■■■■■ 4.17
XPO4-204ENST00000490513 CC2D2AQ9P2K1 1620 aa40.71■■■■■ 4.11
XPO4-204ENST00000490513 EIF4G1Q04637 1599 aaKnown RBP40.65■■■■■ 4.1
XPO4-204ENST00000490513 CECR2Q9BXF3 1484 aa40.56■■■■■ 4.08
XPO4-204ENST00000490513 NCAPD3P42695 1498 aa39.35■■■■□ 3.89
XPO4-204ENST00000490513 SMARCA4P51532 1647 aa39.24■■■■□ 3.87
XPO4-204ENST00000490513 ATAD2BQ9ULI0 1458 aa39.23■■■■□ 3.87
XPO4-204ENST00000490513 SMARCA2P51531 1590 aa39.16■■■■□ 3.86
XPO4-204ENST00000490513 HMGXB3Q12766 1538 aa39.1■■■■□ 3.85
XPO4-204ENST00000490513 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
XPO4-204ENST00000490513 ERCC6Q03468 1493 aa38.88■■■■□ 3.81
XPO4-204ENST00000490513 PEG3Q9GZU2 1588 aa38.87■■■■□ 3.81
XPO4-204ENST00000490513 BAZ1BQ9UIG0 1483 aaKnown RBP38.87■■■■□ 3.81
XPO4-204ENST00000490513 CUX2O14529 1486 aa38.83■■■■□ 3.81
XPO4-204ENST00000490513 MROH2BQ7Z745 1585 aa38.73■■■■□ 3.79
XPO4-204ENST00000490513 NESP48681 1621 aa38.68■■■■□ 3.78
XPO4-204ENST00000490513 DNAJC5Q9H3Z4 198 aa38.66■■■■□ 3.78
XPO4-204ENST00000490513 LAMC3Q9Y6N6 1575 aa38.49■■■■□ 3.75
XPO4-204ENST00000490513 THOC2Q8NI27 1593 aaKnown RBP38.35■■■■□ 3.73
XPO4-204ENST00000490513 WIZO95785 1651 aa38.29■■■■□ 3.72
XPO4-204ENST00000490513 KIF21AQ7Z4S6 1674 aa38.24■■■■□ 3.71
XPO4-204ENST00000490513 PDS5BQ9NTI5 1447 aa38.22■■■■□ 3.71
XPO4-204ENST00000490513 CADPSQ9ULU8 1353 aa38.13■■■■□ 3.69
XPO4-204ENST00000490513 RSF1Q96T23 1441 aaPredicted RBP37.94■■■■□ 3.66
XPO4-204ENST00000490513 MRC2Q9UBG0 1479 aa37.91■■■■□ 3.66
XPO4-204ENST00000490513 TOP2AP11388 1531 aaKnown RBP37.84■■■■□ 3.65
XPO4-204ENST00000490513 WDR62O43379 1518 aa37.83■■■■□ 3.65
XPO4-204ENST00000490513 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
XPO4-204ENST00000490513 CFTRP13569 1480 aa37.73■■■■□ 3.63
XPO4-204ENST00000490513 FANCD2Q9BXW9 1451 aa37.72■■■■□ 3.63
XPO4-204ENST00000490513 PRDM2Q13029 1718 aa37.45■■■■□ 3.59
XPO4-204ENST00000490513 URB2Q14146 1524 aaKnown RBP37.4■■■■□ 3.58
XPO4-204ENST00000490513 CCDC88BA6NC98 1476 aa37.35■■■■□ 3.57
XPO4-204ENST00000490513 TOPBP1Q92547 1522 aa37.02■■■■□ 3.52
XPO4-204ENST00000490513 IFT140Q96RY7 1462 aa37.01■■■■□ 3.52
XPO4-204ENST00000490513 OSCARQ8IYS5 282 aa36.98■■■■□ 3.51
XPO4-204ENST00000490513 ABCC8Q09428 1581 aa36.96■■■■□ 3.51
XPO4-204ENST00000490513 TRIM41Q8WV44 630 aa36.96■■■■□ 3.51
XPO4-204ENST00000490513 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
XPO4-204ENST00000490513 ZNF608Q9ULD9 1512 aaPredicted RBP36.91■■■■□ 3.5
XPO4-204ENST00000490513 SUPT5HO00267 1087 aaKnown RBP36.8■■■■□ 3.48
XPO4-204ENST00000490513 EIF4G3O43432 1585 aaKnown RBP36.78■■■■□ 3.48
XPO4-204ENST00000490513 TARBP1Q13395 1621 aaKnown RBP36.7■■■■□ 3.47
XPO4-204ENST00000490513 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
XPO4-204ENST00000490513 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.45
XPO4-204ENST00000490513 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
XPO4-204ENST00000490513 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
XPO4-204ENST00000490513 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
XPO4-204ENST00000490513 CHD1O14646 1710 aa36.49■■■■□ 3.43
XPO4-204ENST00000490513 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
XPO4-204ENST00000490513 ARHGEF11O15085 1522 aa36.45■■■■□ 3.43
XPO4-204ENST00000490513 SOGA1O94964 1423 aa36.45■■■■□ 3.43
XPO4-204ENST00000490513 FGD5Q6ZNL6 1462 aa36.43■■■■□ 3.42
XPO4-204ENST00000490513 WDR97A6NE52 1622 aa36.39■■■■□ 3.42
XPO4-204ENST00000490513 CUX1P39880 1505 aa36.39■■■■□ 3.42
XPO4-204ENST00000490513 TDRD9Q8NDG6 1382 aaKnown RBP36.34■■■■□ 3.41
XPO4-204ENST00000490513 FBLN2P98095 1184 aa36.29■■■■□ 3.4
XPO4-204ENST00000490513 SNAPC4Q5SXM2 1469 aa36.24■■■■□ 3.39
XPO4-204ENST00000490513 MAGI1Q96QZ7 1491 aaPredicted RBP36.17■■■■□ 3.38
XPO4-204ENST00000490513 GRIN2BQ13224 1484 aa36.16■■■■□ 3.38
XPO4-204ENST00000490513 CYB5RLQ6IPT4 315 aa36.09■■■■□ 3.37
XPO4-204ENST00000490513 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
XPO4-204ENST00000490513 PBRM1Q86U86 1689 aa36.07■■■■□ 3.37
XPO4-204ENST00000490513 CLASP1Q7Z460 1538 aa36.07■■■■□ 3.36
XPO4-204ENST00000490513 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
XPO4-204ENST00000490513 CHMP7Q8WUX9 453 aaPredicted RBP36.05■■■■□ 3.36
XPO4-204ENST00000490513 SYNJ2O15056 1496 aa36.04■■■■□ 3.36
XPO4-204ENST00000490513 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
XPO4-204ENST00000490513 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
XPO4-204ENST00000490513 ABCA5Q8WWZ7 1642 aa36■■■■□ 3.35
XPO4-204ENST00000490513 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.33
XPO4-204ENST00000490513 WRNQ14191 1432 aaPredicted RBP eCLIP35.87■■■■□ 3.33
XPO4-204ENST00000490513 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
XPO4-204ENST00000490513 ADAMTS12P58397 1594 aa35.72■■■■□ 3.31
XPO4-204ENST00000490513 GRIN2AQ12879 1464 aa35.7■■■■□ 3.31
XPO4-204ENST00000490513 TRHP20396 242 aaPredicted RBP35.68■■■■□ 3.3
XPO4-204ENST00000490513 ERICH3Q5RHP9 1530 aa35.59■■■■□ 3.29
XPO4-204ENST00000490513 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
XPO4-204ENST00000490513 FHAD1B1AJZ9 1412 aa35.57■■■■□ 3.29
XPO4-204ENST00000490513 NUP160Q12769 1436 aa35.57■■■■□ 3.29
XPO4-204ENST00000490513 ERCC6L2Q5T890 1561 aa35.47■■■■□ 3.27
XPO4-204ENST00000490513 SHROOM2Q13796 1616 aa35.44■■■■□ 3.26
XPO4-204ENST00000490513 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
XPO4-204ENST00000490513 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.23
XPO4-204ENST00000490513 JPH4Q96JJ6 628 aa35.14■■■■□ 3.22
XPO4-204ENST00000490513 KIF27Q86VH2 1401 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms