RNA–Protein interactions for RNA: ENST00000490486.2

ABCA2-220, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 666 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-220ENST00000490486 NISCHQ9Y2I1 1504 aa38.93■■■■□ 3.82
ABCA2-220ENST00000490486 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
ABCA2-220ENST00000490486 ABCC9O60706 1549 aa34.16■■■■□ 3.06
ABCA2-220ENST00000490486 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
ABCA2-220ENST00000490486 NACADO15069 1562 aa32.61■■■□□ 2.81
ABCA2-220ENST00000490486 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
ABCA2-220ENST00000490486 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
ABCA2-220ENST00000490486 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
ABCA2-220ENST00000490486 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
ABCA2-220ENST00000490486 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
ABCA2-220ENST00000490486 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
ABCA2-220ENST00000490486 PABPN1Q86U42 306 aaKnown RBP eCLIP31.86■■■□□ 2.691e-5■□□□□ 8.6
ABCA2-220ENST00000490486 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
ABCA2-220ENST00000490486 DNAJC5BQ9UF47 199 aa31.62■■■□□ 2.65
ABCA2-220ENST00000490486 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
ABCA2-220ENST00000490486 EIF4G1Q04637 1599 aaKnown RBP30.97■■■□□ 2.55
ABCA2-220ENST00000490486 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
ABCA2-220ENST00000490486 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
ABCA2-220ENST00000490486 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
ABCA2-220ENST00000490486 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
ABCA2-220ENST00000490486 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
ABCA2-220ENST00000490486 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
ABCA2-220ENST00000490486 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
ABCA2-220ENST00000490486 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
ABCA2-220ENST00000490486 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
ABCA2-220ENST00000490486 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
ABCA2-220ENST00000490486 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
ABCA2-220ENST00000490486 WIZO95785 1651 aa29.75■■■□□ 2.35
ABCA2-220ENST00000490486 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
ABCA2-220ENST00000490486 NESP48681 1621 aa29.56■■■□□ 2.32
ABCA2-220ENST00000490486 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
ABCA2-220ENST00000490486 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
ABCA2-220ENST00000490486 LAMC3Q9Y6N6 1575 aa29.34■■■□□ 2.29
ABCA2-220ENST00000490486 KIF21AQ7Z4S6 1674 aa29.22■■■□□ 2.27
ABCA2-220ENST00000490486 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
ABCA2-220ENST00000490486 THOC2Q8NI27 1593 aaKnown RBP29.17■■■□□ 2.26
ABCA2-220ENST00000490486 CUX2O14529 1486 aa29.13■■■□□ 2.25
ABCA2-220ENST00000490486 PDS5BQ9NTI5 1447 aa29.07■■■□□ 2.24
ABCA2-220ENST00000490486 CFTRP13569 1480 aa29.03■■■□□ 2.24
ABCA2-220ENST00000490486 CCDC88BA6NC98 1476 aa29.01■■■□□ 2.23
ABCA2-220ENST00000490486 FANCD2Q9BXW9 1451 aa28.9■■■□□ 2.22
ABCA2-220ENST00000490486 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
ABCA2-220ENST00000490486 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
ABCA2-220ENST00000490486 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
ABCA2-220ENST00000490486 WDR62O43379 1518 aa28.83■■■□□ 2.21
ABCA2-220ENST00000490486 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
ABCA2-220ENST00000490486 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
ABCA2-220ENST00000490486 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
ABCA2-220ENST00000490486 TOPBP1Q92547 1522 aa28.44■■■□□ 2.14
ABCA2-220ENST00000490486 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
ABCA2-220ENST00000490486 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
ABCA2-220ENST00000490486 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
ABCA2-220ENST00000490486 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
ABCA2-220ENST00000490486 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
ABCA2-220ENST00000490486 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
ABCA2-220ENST00000490486 CUX1P39880 1505 aa28.2■■■□□ 2.1
ABCA2-220ENST00000490486 EIF4G3O43432 1585 aaKnown RBP28.12■■■□□ 2.09
ABCA2-220ENST00000490486 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
ABCA2-220ENST00000490486 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
ABCA2-220ENST00000490486 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.081e-11■■■■■ 28.5
ABCA2-220ENST00000490486 SOGA1O94964 1423 aa28■■■□□ 2.07
ABCA2-220ENST00000490486 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
ABCA2-220ENST00000490486 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
ABCA2-220ENST00000490486 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
ABCA2-220ENST00000490486 BIVM-ERCC5R4GMW8 1640 aa27.9■■■□□ 2.06
ABCA2-220ENST00000490486 TOP2BQ02880 1626 aa27.87■■■□□ 2.05
ABCA2-220ENST00000490486 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
ABCA2-220ENST00000490486 CHD1O14646 1710 aa27.84■■■□□ 2.05
ABCA2-220ENST00000490486 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
ABCA2-220ENST00000490486 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
ABCA2-220ENST00000490486 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
ABCA2-220ENST00000490486 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
ABCA2-220ENST00000490486 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
ABCA2-220ENST00000490486 GRIN2BQ13224 1484 aa27.7■■■□□ 2.03
ABCA2-220ENST00000490486 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
ABCA2-220ENST00000490486 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
ABCA2-220ENST00000490486 FBLN2P98095 1184 aa27.6■■■□□ 2.01
ABCA2-220ENST00000490486 RIMBP3CA6NJZ7 1639 aa27.58■■■□□ 2.01
ABCA2-220ENST00000490486 RIMBP3BA6NNM3 1639 aa27.58■■■□□ 2.01
ABCA2-220ENST00000490486 RIMBP3Q9UFD9 1639 aa27.58■■■□□ 2.01
ABCA2-220ENST00000490486 SYNJ2O15056 1496 aa27.56■■■□□ 2
ABCA2-220ENST00000490486 ARHGEF11O15085 1522 aa27.51■■■□□ 2
ABCA2-220ENST00000490486 CLASP1Q7Z460 1538 aa27.51■■□□□ 1.99
ABCA2-220ENST00000490486 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
ABCA2-220ENST00000490486 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
ABCA2-220ENST00000490486 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
ABCA2-220ENST00000490486 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
ABCA2-220ENST00000490486 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
ABCA2-220ENST00000490486 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
ABCA2-220ENST00000490486 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
ABCA2-220ENST00000490486 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
ABCA2-220ENST00000490486 NUP160Q12769 1436 aa27.28■■□□□ 1.96
ABCA2-220ENST00000490486 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
ABCA2-220ENST00000490486 IGF1RP08069 1367 aa27.22■■□□□ 1.95
ABCA2-220ENST00000490486 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
ABCA2-220ENST00000490486 CYB5RLQ6IPT4 315 aa27.17■■□□□ 1.94
ABCA2-220ENST00000490486 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
ABCA2-220ENST00000490486 CUL7Q14999 1698 aa27.14■■□□□ 1.94
ABCA2-220ENST00000490486 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
ABCA2-220ENST00000490486 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms