RNA–Protein interactions for RNA: ENST00000490464.1

ACSS2-219, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 3

Gene ACSS2, Length 280 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-219ENST00000490464 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
ACSS2-219ENST00000490464 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
ACSS2-219ENST00000490464 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
ACSS2-219ENST00000490464 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
ACSS2-219ENST00000490464 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
ACSS2-219ENST00000490464 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
ACSS2-219ENST00000490464 ABCC9O60706 1549 aa19.89■□□□□ 0.77
ACSS2-219ENST00000490464 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
ACSS2-219ENST00000490464 NACADO15069 1562 aa19.74■□□□□ 0.75
ACSS2-219ENST00000490464 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
ACSS2-219ENST00000490464 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
ACSS2-219ENST00000490464 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
ACSS2-219ENST00000490464 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
ACSS2-219ENST00000490464 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
ACSS2-219ENST00000490464 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
ACSS2-219ENST00000490464 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
ACSS2-219ENST00000490464 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
ACSS2-219ENST00000490464 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
ACSS2-219ENST00000490464 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
ACSS2-219ENST00000490464 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
ACSS2-219ENST00000490464 WIZO95785 1651 aa18.63■□□□□ 0.57
ACSS2-219ENST00000490464 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
ACSS2-219ENST00000490464 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
ACSS2-219ENST00000490464 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
ACSS2-219ENST00000490464 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
ACSS2-219ENST00000490464 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
ACSS2-219ENST00000490464 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
ACSS2-219ENST00000490464 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
ACSS2-219ENST00000490464 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
ACSS2-219ENST00000490464 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
ACSS2-219ENST00000490464 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
ACSS2-219ENST00000490464 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
ACSS2-219ENST00000490464 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
ACSS2-219ENST00000490464 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
ACSS2-219ENST00000490464 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
ACSS2-219ENST00000490464 CFTRP13569 1480 aa17.81■□□□□ 0.44
ACSS2-219ENST00000490464 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
ACSS2-219ENST00000490464 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
ACSS2-219ENST00000490464 FAM9AQ8IZU1 332 aaPredicted RBP17.72■□□□□ 0.43
ACSS2-219ENST00000490464 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
ACSS2-219ENST00000490464 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
ACSS2-219ENST00000490464 EEA1Q15075 1411 aa17.7■□□□□ 0.42
ACSS2-219ENST00000490464 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
ACSS2-219ENST00000490464 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
ACSS2-219ENST00000490464 SOGA1O94964 1423 aa17.58■□□□□ 0.41
ACSS2-219ENST00000490464 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
ACSS2-219ENST00000490464 CUX1P39880 1505 aa17.56■□□□□ 0.4
ACSS2-219ENST00000490464 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
ACSS2-219ENST00000490464 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
ACSS2-219ENST00000490464 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
ACSS2-219ENST00000490464 NESP48681 1621 aa17.47■□□□□ 0.39
ACSS2-219ENST00000490464 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
ACSS2-219ENST00000490464 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
ACSS2-219ENST00000490464 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
ACSS2-219ENST00000490464 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
ACSS2-219ENST00000490464 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
ACSS2-219ENST00000490464 KIF21BO75037 1637 aa17.42■□□□□ 0.38
ACSS2-219ENST00000490464 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
ACSS2-219ENST00000490464 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
ACSS2-219ENST00000490464 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
ACSS2-219ENST00000490464 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
ACSS2-219ENST00000490464 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
ACSS2-219ENST00000490464 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
ACSS2-219ENST00000490464 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
ACSS2-219ENST00000490464 CUX2O14529 1486 aa17.29■□□□□ 0.36
ACSS2-219ENST00000490464 ERICH3Q5RHP9 1530 aa17.28■□□□□ 0.36
ACSS2-219ENST00000490464 URB2Q14146 1524 aaKnown RBP17.27■□□□□ 0.36
ACSS2-219ENST00000490464 CEP162Q5TB80 1403 aa17.27■□□□□ 0.35
ACSS2-219ENST00000490464 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
ACSS2-219ENST00000490464 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
ACSS2-219ENST00000490464 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
ACSS2-219ENST00000490464 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
ACSS2-219ENST00000490464 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
ACSS2-219ENST00000490464 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
ACSS2-219ENST00000490464 IGF1RP08069 1367 aa17.17■□□□□ 0.34
ACSS2-219ENST00000490464 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
ACSS2-219ENST00000490464 CLIP1P30622 1438 aa17.13■□□□□ 0.33
ACSS2-219ENST00000490464 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
ACSS2-219ENST00000490464 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
ACSS2-219ENST00000490464 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
ACSS2-219ENST00000490464 CUL7Q14999 1698 aa17.1■□□□□ 0.33
ACSS2-219ENST00000490464 WDR62O43379 1518 aa17.08■□□□□ 0.32
ACSS2-219ENST00000490464 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
ACSS2-219ENST00000490464 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
ACSS2-219ENST00000490464 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
ACSS2-219ENST00000490464 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
ACSS2-219ENST00000490464 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
ACSS2-219ENST00000490464 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
ACSS2-219ENST00000490464 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
ACSS2-219ENST00000490464 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
ACSS2-219ENST00000490464 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
ACSS2-219ENST00000490464 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
ACSS2-219ENST00000490464 APLP2Q06481 763 aa16.92■□□□□ 0.3
ACSS2-219ENST00000490464 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
ACSS2-219ENST00000490464 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
ACSS2-219ENST00000490464 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
ACSS2-219ENST00000490464 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
ACSS2-219ENST00000490464 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.295e-8■■■■□ 23.5
ACSS2-219ENST00000490464 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
ACSS2-219ENST00000490464 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms