RNA–Protein interactions for RNA: ENST00000490395.5

ZSWIM7-211, Transcript of zinc finger SWIM-type containing 7, humanhuman

TSL 1 (best)

Gene ZSWIM7, Length 1,264 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM7-211ENST00000490395 NISCHQ9Y2I1 1504 aa48.02■■■■■ 5.28
ZSWIM7-211ENST00000490395 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
ZSWIM7-211ENST00000490395 ABCC9O60706 1549 aa42.16■■■■■ 4.34
ZSWIM7-211ENST00000490395 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.08
ZSWIM7-211ENST00000490395 NACADO15069 1562 aa40.43■■■■■ 4.06
ZSWIM7-211ENST00000490395 DCAF8L2P0C7V8 631 aa40.13■■■■■ 4.01
ZSWIM7-211ENST00000490395 MYO15BQ96JP2 1530 aa40.1■■■■■ 4.01
ZSWIM7-211ENST00000490395 ZCCHC6Q5VYS8 1495 aaKnown RBP39.96■■■■□ 3.99
ZSWIM7-211ENST00000490395 DCAF1Q9Y4B6 1507 aa39.79■■■■□ 3.96
ZSWIM7-211ENST00000490395 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
ZSWIM7-211ENST00000490395 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.87
ZSWIM7-211ENST00000490395 BICRAQ9NZM4 1560 aa39.22■■■■□ 3.87
ZSWIM7-211ENST00000490395 SCRIBQ14160 1630 aa39.07■■■■□ 3.84
ZSWIM7-211ENST00000490395 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
ZSWIM7-211ENST00000490395 DNAJC5BQ9UF47 199 aa38.8■■■■□ 3.8
ZSWIM7-211ENST00000490395 EIF4G1Q04637 1599 aaKnown RBP38.27■■■■□ 3.72
ZSWIM7-211ENST00000490395 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
ZSWIM7-211ENST00000490395 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
ZSWIM7-211ENST00000490395 SMARCA4P51532 1647 aa37.37■■■■□ 3.57
ZSWIM7-211ENST00000490395 BAZ1AQ9NRL2 1556 aaPredicted RBP37.31■■■■□ 3.56
ZSWIM7-211ENST00000490395 SMARCA2P51531 1590 aa37.24■■■■□ 3.55
ZSWIM7-211ENST00000490395 NCAPD3P42695 1498 aa37.23■■■■□ 3.55
ZSWIM7-211ENST00000490395 ATAD2BQ9ULI0 1458 aa37.19■■■■□ 3.54
ZSWIM7-211ENST00000490395 HMGXB3Q12766 1538 aa37.1■■■■□ 3.53
ZSWIM7-211ENST00000490395 PEG3Q9GZU2 1588 aa37.02■■■■□ 3.52
ZSWIM7-211ENST00000490395 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
ZSWIM7-211ENST00000490395 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
ZSWIM7-211ENST00000490395 WIZO95785 1651 aa36.56■■■■□ 3.44
ZSWIM7-211ENST00000490395 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
ZSWIM7-211ENST00000490395 RSF1Q96T23 1441 aaPredicted RBP36.41■■■■□ 3.42
ZSWIM7-211ENST00000490395 LAMC3Q9Y6N6 1575 aa36.39■■■■□ 3.42
ZSWIM7-211ENST00000490395 NESP48681 1621 aa36.36■■■■□ 3.41
ZSWIM7-211ENST00000490395 CUX2O14529 1486 aa36.23■■■■□ 3.39
ZSWIM7-211ENST00000490395 TOP2AP11388 1531 aaKnown RBP36.23■■■■□ 3.39
ZSWIM7-211ENST00000490395 PDS5BQ9NTI5 1447 aa36.12■■■■□ 3.37
ZSWIM7-211ENST00000490395 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
ZSWIM7-211ENST00000490395 KIF21AQ7Z4S6 1674 aa36.03■■■■□ 3.36
ZSWIM7-211ENST00000490395 THOC2Q8NI27 1593 aaKnown RBP35.99■■■■□ 3.35
ZSWIM7-211ENST00000490395 CFTRP13569 1480 aa35.86■■■■□ 3.33
ZSWIM7-211ENST00000490395 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
ZSWIM7-211ENST00000490395 MRC2Q9UBG0 1479 aa35.76■■■■□ 3.32
ZSWIM7-211ENST00000490395 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
ZSWIM7-211ENST00000490395 PRDM2Q13029 1718 aa35.71■■■■□ 3.31
ZSWIM7-211ENST00000490395 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.31
ZSWIM7-211ENST00000490395 WDR62O43379 1518 aa35.66■■■■□ 3.3
ZSWIM7-211ENST00000490395 URB2Q14146 1524 aaKnown RBP35.35■■■■□ 3.25
ZSWIM7-211ENST00000490395 DNAJC5Q9H3Z4 198 aa35.33■■■■□ 3.25
ZSWIM7-211ENST00000490395 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
ZSWIM7-211ENST00000490395 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
ZSWIM7-211ENST00000490395 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
ZSWIM7-211ENST00000490395 DNMBPQ6XZF7 1577 aa35.11■■■■□ 3.21
ZSWIM7-211ENST00000490395 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
ZSWIM7-211ENST00000490395 POLA1P09884 1462 aaPredicted RBP34.79■■■■□ 3.16
ZSWIM7-211ENST00000490395 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
ZSWIM7-211ENST00000490395 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
ZSWIM7-211ENST00000490395 EIF4G3O43432 1585 aaKnown RBP34.74■■■■□ 3.15
ZSWIM7-211ENST00000490395 CUX1P39880 1505 aa34.71■■■■□ 3.15
ZSWIM7-211ENST00000490395 FGD5Q6ZNL6 1462 aa34.67■■■■□ 3.14
ZSWIM7-211ENST00000490395 SOGA1O94964 1423 aa34.62■■■■□ 3.13
ZSWIM7-211ENST00000490395 WDR97A6NE52 1622 aa34.62■■■■□ 3.13
ZSWIM7-211ENST00000490395 RAD54L2Q9Y4B4 1467 aa34.58■■■■□ 3.13
ZSWIM7-211ENST00000490395 OSCARQ8IYS5 282 aa34.56■■■■□ 3.12
ZSWIM7-211ENST00000490395 AQRO60306 1485 aaKnown RBP eCLIP34.53■■■■□ 3.122e-8■■■■■ 33.4
ZSWIM7-211ENST00000490395 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
ZSWIM7-211ENST00000490395 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
ZSWIM7-211ENST00000490395 WRNQ14191 1432 aaPredicted RBP eCLIP34.4■■■■□ 3.1
ZSWIM7-211ENST00000490395 TOP2BQ02880 1626 aa34.39■■■■□ 3.1
ZSWIM7-211ENST00000490395 CHD1O14646 1710 aa34.37■■■■□ 3.09
ZSWIM7-211ENST00000490395 ABCA10Q8WWZ4 1543 aa34.34■■■■□ 3.09
ZSWIM7-211ENST00000490395 GRIN2BQ13224 1484 aa34.32■■■■□ 3.08
ZSWIM7-211ENST00000490395 SYNJ1O43426 1573 aa34.31■■■■□ 3.08
ZSWIM7-211ENST00000490395 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
ZSWIM7-211ENST00000490395 SNAPC4Q5SXM2 1469 aa34.28■■■■□ 3.08
ZSWIM7-211ENST00000490395 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
ZSWIM7-211ENST00000490395 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
ZSWIM7-211ENST00000490395 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
ZSWIM7-211ENST00000490395 FBLN2P98095 1184 aa34.2■■■■□ 3.07
ZSWIM7-211ENST00000490395 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
ZSWIM7-211ENST00000490395 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
ZSWIM7-211ENST00000490395 RIMBP3CA6NJZ7 1639 aa34.09■■■■□ 3.05
ZSWIM7-211ENST00000490395 RIMBP3BA6NNM3 1639 aa34.09■■■■□ 3.05
ZSWIM7-211ENST00000490395 RIMBP3Q9UFD9 1639 aa34.09■■■■□ 3.05
ZSWIM7-211ENST00000490395 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
ZSWIM7-211ENST00000490395 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
ZSWIM7-211ENST00000490395 ERICH3Q5RHP9 1530 aa33.96■■■■□ 3.03
ZSWIM7-211ENST00000490395 CLASP1Q7Z460 1538 aa33.96■■■■□ 3.03
ZSWIM7-211ENST00000490395 ADAMTS12P58397 1594 aa33.96■■■■□ 3.03
ZSWIM7-211ENST00000490395 GRIN2AQ12879 1464 aa33.87■■■■□ 3.01
ZSWIM7-211ENST00000490395 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
ZSWIM7-211ENST00000490395 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
ZSWIM7-211ENST00000490395 ARAP1Q96P48 1450 aa33.72■■■□□ 2.99
ZSWIM7-211ENST00000490395 NUP160Q12769 1436 aa33.71■■■□□ 2.99
ZSWIM7-211ENST00000490395 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
ZSWIM7-211ENST00000490395 CYB5RLQ6IPT4 315 aa33.65■■■□□ 2.98
ZSWIM7-211ENST00000490395 CUL7Q14999 1698 aa33.64■■■□□ 2.98
ZSWIM7-211ENST00000490395 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
ZSWIM7-211ENST00000490395 IGF1RP08069 1367 aa33.52■■■□□ 2.96
ZSWIM7-211ENST00000490395 RUSC2Q8N2Y8 1516 aa33.47■■■□□ 2.95
ZSWIM7-211ENST00000490395 CARMIL1Q5VZK9 1371 aa33.37■■■□□ 2.93
ZSWIM7-211ENST00000490395 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms